RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 4933409G03RikQ8C5U0 320 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Phtf2Q8CB19 747 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Cdk17Q8K0D0 523 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Olfr393Q8VGR6 312 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Calml4Q91WQ9 153 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Golph3Q9CRA5 298 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Slc5a4aQ9ET37 656 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Rilpl1Q9JJC6 406 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Trp53inp1Q9QXE4 239 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Prpf40aQ9R1C7 953 aaKnown RBP9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Mia3Q8BI84 1930 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Osbpl7A2A716 963 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Prdm12A2AJ77 365 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gfpt1P47856 697 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Nub1P54729 614 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Pafah1b1P63005 410 aaKnown RBP9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Capza3P70190 299 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Hace1Q3U0D9 909 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ddx3xQ62167 662 aaKnown RBP9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Mrgprb8Q7TN51 330 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 B3glctQ8BHT6 489 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Snx17Q8BVL3 470 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Zc3h6Q8BYK8 1177 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Phc3Q8CHP6 981 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Rnf34Q99KR6 376 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Tlr3Q99MB1 905 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Asah2Q9JHE3 756 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Sfmbt1Q9JMD1 863 aa9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Lama2Q60675 3118 aaKnown RBP9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Myo5aQ99104 1853 aaKnown RBP9.36□□□□□ -0.91
Trim39-201ENSMUST00000042717 Rap1gapA2ALS5 663 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gm17535J3KMR8 224 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Cd86P42082 309 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Asprv1Q09PK2 339 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 FdxrQ61578 494 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 NrcamQ810U4 1256 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Maats1Q8BRC6 783 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Phka2Q8BWJ3 1235 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Slc7a14Q8BXR1 771 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Cog3Q8CI04 820 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Defb19Q8K3I8 83 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Srgap2Q91Z67 1071 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Q922R1 422 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Doc2gQ9ESN1 387 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Pate3B3GLJ3 98 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ptchd4B9EKX1 904 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gm10801F7C7Q0 168 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 GlrbP48168 496 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gjb6P70689 261 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Atp9bP98195 1146 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Tmtc1Q3UV71 942 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Stxbp5lQ5DQR4 1185 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 MmeQ61391 750 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ddx3yQ62095 658 aaKnown RBP9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Lrig3Q6P1C6 1117 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Tor4aQ8BH02 426 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gys2Q8VCB3 704 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Bzw2Q91VK1 419 aaKnown RBP9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Acsl3Q9CZW4 720 aaKnown RBP9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Chst7Q9EP78 484 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Znf394Q9Z1D9 521 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Klhl33G3UW92 533 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Rnpc3Q3UZ01 514 aaKnown RBP9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Sema4bQ62179 823 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Q66JV7 365 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Mysm1Q69Z66 819 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Snd1Q78PY7 910 aaKnown RBP9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Fgd5Q80UZ0 1219 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Nucks1Q80XU3 234 aaKnown RBP9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Haus1Q8BHX1 278 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Zswim4Q8C7B8 1101 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Tmem132aQ922P8 1018 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Luc7lQ9CYI4 371 aaKnown RBP9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Dnajb7Q9QYI8 312 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Morc1Q9WVL5 950 aa9.35□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gml2G5E8L7 176 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Xrcc6P23475 608 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Glud1P26443 558 aaKnown RBP9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Rnf19aP50636 840 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Cdh8P97291 799 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Ccdc102aQ3TMW1 549 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Gm5935Q497S0 212 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Zbtb8osQ505B7 168 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 FancbQ5XJY6 703 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Cyp3a16Q64481 504 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Agap1Q8BXK8 857 aaKnown RBP9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Fam160b1Q8CDM8 764 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Vopp1Q8R1C3 172 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Pcdhgb4Q91XX6 912 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Mrpl2Q9D773 306 aaKnown RBP9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Alg13Q9D8C3 1166 aaKnown RBP9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Capn12Q9ER56 720 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Trim54Q9ERP3 366 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Rpf2Q9JJ80 306 aaKnown RBP9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Uchl3Q9JKB1 230 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Zdbf2Q5SS00 2493 aaKnown RBP9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Zscan4-ps3A0A1B0GRH6 506 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Zscan4-ps2A0A1C7CYU6 506 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Rnf19bA2A7Q9 732 aa9.34□□□□□ -0.91
Trim39-201ENSMUST00000042717 Slc16a6B1AT66 607 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms