RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Ces1cP23953 554 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Lig1P37913 916 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Inpp1P49442 396 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Krt86P97861 486 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cd300lgQ1ERP8 331 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Zc3hav1Q3UPF5 946 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rc3h1Q4VGL6 1130 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rgl1Q60695 768 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Jade1Q6ZPI0 834 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Stard7Q8R1R3 373 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 CoasyQ9DBL7 563 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 CntrlA2AL36 2334 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Trim12cD3Z3L3 497 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 1700024B05RikE9Q6D7 167 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Lrrc32G3XA59 663 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 BhmtO35490 407 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 GpiP06745 558 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 PuraP42669 321 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Hif1aQ61221 836 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ifit1Q64282 463 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rtl3Q6P1Y1 553 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Scgb2b2Q6UGQ3 114 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Asnsd1Q8BFS9 627 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Tp53bp2Q8CG79 1128 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 GcshQ91WK5 170 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Abcf2Q99LE6 628 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Abcg3Q99P81 650 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Khdc3Q9CWU5 440 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 ParvbQ9ES46 365 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cd2apQ9JLQ0 637 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gbp11A9YVJ5 442 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Orc4O88708 433 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 LtkP08923 888 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cnot7Q60809 285 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Abcf3Q8K268 709 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Swi5Q8K3D3 89 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 PlvapQ91VC4 438 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Q9D1Z2 194 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ankrd12G5E893 2041 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 MttpO08601 894 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 CtshP49935 333 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Klrb1Q0ZUP1 214 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Tcp10aQ80W76 438 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ahi1Q8K3E5 1047 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Atp5c1Q91VR2 298 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Tm9sf1Q9DBU0 606 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Hmg20aQ9DC33 346 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Per2O54943 1257 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Nfkbil1O88995 381 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Arpc4P59999 168 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Trpc5osQ3UHV4 110 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 TrhQ62361 256 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 NostrinQ6WKZ7 506 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Tsen34Q8BMZ5 316 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Q8CIL4 281 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Mta1Q8K4B0 715 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 XpotQ9CRT8 963 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Snx5Q9D8U8 404 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Psmg1Q9JK23 289 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Slc27a6E9Q9W4 619 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gm7535F7CXE4 302 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Vti1bO88384 232 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Myl4P09541 193 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Dab1P97318 588 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Magee2Q52KG3 523 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Bcap31Q61335 245 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ahcyl2Q68FL4 613 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rundc3bQ6PDC0 408 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Tmem132dQ76HP3 1097 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Slitrk3Q810B9 980 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cdca7Q9D0M2 382 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Extl3Q9WVL6 918 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Bub1bQ9Z1S0 1052 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Arhgap36B1AUC7 590 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ifnar1P33896 590 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rit2P70425 217 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cyp11b1Q3TG86 501 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Miga1Q4QQM5 600 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Zbtb5Q7TQG0 670 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rmnd1Q8CI78 450 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Klhl36Q8R124 613 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Mrpl46Q9EQI8 283 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gmeb1Q9JL60 562 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 BcamQ9R069 622 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Eif2ak1Q9Z2R9 619 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rsbn1lD3Z0K6 821 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gm2237E9Q501 211 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gm3591K7N6X2 186 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Orm2P07361 207 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rb1P13405 921 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Jade3Q6IE82 823 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Spag7Q7TNE3 227 aaKnown RBP4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Efl1Q8C0D5 1127 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gfm2Q8R2Q4 779 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 AslQ91YI0 464 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Mov10l1Q99MV5 1187 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Usp26Q99MX1 835 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Apobec2Q9WV35 224 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 B020011L13RikA0A087WQI7 412 aa4.8□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cyp2j7A0A140T8U1 504 aa4.8□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms