RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Gm3173A6NAS3 172 aa16.02■□□□□ 0.16
Col2a1-201ENSMUST00000023123 Gm3020E9Q3J7 150 aa16.02■□□□□ 0.16
Col2a1-201ENSMUST00000023123 Gm2897K7N6T7 172 aa16.02■□□□□ 0.16
Col2a1-201ENSMUST00000023123 Meis3P97368 378 aa16.02■□□□□ 0.16
Col2a1-201ENSMUST00000023123 Gm3411Q8C7R2 150 aa16.02■□□□□ 0.16
Col2a1-201ENSMUST00000023123 Kbtbd4Q8R179 534 aa16.02■□□□□ 0.16
Col2a1-201ENSMUST00000023123 Capn7Q9R1S8 813 aa16.02■□□□□ 0.16
Col2a1-201ENSMUST00000023123 Ago2Q8CJG0 860 aaKnown RBP16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Amhr2Q8K592 568 aa16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Tti1Q91V83 1085 aa16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Rgs10Q9CQE5 181 aa16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 AvenQ9D9K3 342 aa16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 CrotQ9DC50 612 aa16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Atp10bB1AWN4 1474 aa16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 CiitaP79621 1155 aa16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Kcnma1Q08460 1209 aa16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Xlr3cQ61806 226 aa16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Ces1fQ91WU0 561 aa16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Uchl3Q9JKB1 230 aa16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Slc22a3Q9WTW5 551 aa16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Map3k15A2AQW0 1331 aa16.02■□□□□ 0.15
Col2a1-201ENSMUST00000023123 ChrngP04760 519 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 S100a9P31725 113 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Kcnk9Q3LS21 402 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Fam160a1Q505K2 1081 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Zfp341Q6PGC9 846 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Ush1gQ80T11 461 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Ttc7aQ8BGB2 858 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Wdr35Q8BND3 1181 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Svs3bQ8BZH8 265 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Dact1Q8R4A3 778 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Vwa5aQ99KC8 793 aaKnown RBP16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Mrpl4Q9DCU6 294 aaKnown RBP16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Cdc42bpgQ80UW5 1551 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Nme9A0A1L1SUL6 329 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Rsrc2A2RTL5 376 aaKnown RBP16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 SftpdP50404 374 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Cyp2e1Q05421 493 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Eno4Q8C042 619 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 UvragQ8K245 698 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Ttc30a1Q99J38 664 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Castor1Q9CWQ8 331 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Nme3Q9WV85 169 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Cdhr2E9Q7P9 1308 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Pramel3A2AHA7 463 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Lzts3A2AHG0 700 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Gm7903A2AWL1 463 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 AV320801A2AWL3 467 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Gm15023L7MUB4 467 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Abce1P61222 599 aaKnown RBP16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Atp13a5Q3TYU2 1216 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 SnrpaQ62189 287 aaKnown RBP16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 BC048507Q80ZS7 89 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Acot3Q9QYR7 432 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Ino80Q6ZPV2 1559 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Rad51ap2G3UW63 976 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Usp4P35123 962 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Sar1aP36536 198 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Ccdc185Q3V118 621 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 RnmtQ9D0L8 465 aaKnown RBP16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Dgcr8Q9EQM6 773 aa16.01■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Plekhg4A0A1L1SU27 1217 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Zc3h7bF8VPP8 982 aaKnown RBP16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Npas2P97460 816 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Sv2cQ69ZS6 727 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Senp6Q6P7W0 1132 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Btbd6Q8K2J9 488 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Ube2sQ921J4 223 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Rnf123Q5XPI3 1314 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Mageb2A2AHM0 380 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Cdo1P60334 200 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Fam196bQ6GQV1 535 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Zfp454Q80Y34 536 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Drd5Q8BLD9 478 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Serpina3bQ8BYY9 420 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Tlk1Q8C0V0 766 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Vps37aQ8CHS8 397 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Rfc4Q99J62 364 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 CalcbQ99MP3 130 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Pabpc6Q9D4E6 643 aaKnown RBP16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Fam167bP17257 162 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 OatP29758 439 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Sash1P59808 1230 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Rab6bP61294 208 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Gcnt1Q09324 428 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Tnni3kQ5GIG6 834 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Tmem117Q8BH18 514 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Fbxo44Q8BK26 255 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Mtss1Q8R1S4 759 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Homer3Q99JP6 356 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Hspbp1Q99P31 357 aaKnown RBP16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Xpo7Q9EPK7 1087 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Scgb2b20Q9JI02 112 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 B020011L13RikA0A087WQI7 412 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Lzts1P60853 599 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Btbd7Q8CFE5 1130 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 P3h2Q8CG71 703 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Zcchc18Q8VD24 393 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Ppp1r16bQ8VHQ3 568 aa16■□□□□ 0.15
Col2a1-201ENSMUST00000023123 Polr3fQ921X6 316 aa16■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms