RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Smndc1Q8BGT7 238 aaKnown RBP12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Cpsf7Q8BTV2 471 aaKnown RBP12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Sh3rf3Q8C120 878 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Rab44Q8CB87 725 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Bag2Q91YN9 210 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Dqx1Q924H9 718 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Hdac9Q99N13 588 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Rex1bdQ9CYZ6 169 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Dpp7Q9ET22 506 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 JmyQ9QXM1 983 aa12.85□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gm45261A0A1B0GSP6 197 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Krt36B1AQ75 473 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 JrklB2RRL2 523 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 A430078G23RikE9Q7Y4 484 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Cdh16O88338 830 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 GcP21614 476 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Rfx2P48379 717 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Mark3Q03141 753 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Zfyve27Q3TXX3 415 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Spata24Q6P926 205 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 DaglaQ6WQJ1 1044 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 PolrmtQ8BKF1 1207 aaKnown RBP12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Slc9a9Q8BZ00 644 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Vps52Q8C754 723 aaKnown RBP12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Vmn1r64Q8R2B8 320 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Pgm1Q9D0F9 562 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gpihbp1Q9D1N2 228 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Trim42Q9D2H5 723 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Terb2Q9D494 218 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Mipol1Q9D9F8 279 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 DmgdhQ9DBT9 869 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Phtf1Q9QZ09 761 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Eya4Q9Z191 616 aa12.84□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Morc3F7BJB9 942 aaKnown RBP12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Tekt5G5E8A8 557 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gsta3P30115 221 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Eef2P58252 858 aaKnown RBP12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Psmc6P62334 389 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Yipf3Q3UDR8 347 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Miga1Q4QQM5 600 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 SpdyaQ5IBH7 310 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Scaf8Q6DID3 1268 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ints8Q80V86 995 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Rhbdf2Q80WQ6 827 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gm5622Q810Q0 167 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Tbc1d10cQ8C9V1 444 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Sgsm3Q8VCZ6 750 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Vps36Q91XD6 386 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Nt5c1bQ91YE9 573 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Asb11Q9CQ31 323 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Fam90a1bQ9D4F3 419 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Znf654Q9DAU9 571 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Tfr2Q9JKX3 798 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Krt17Q9QWL7 433 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Hao1Q9WU19 370 aa12.83□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Zbtb11G5E8B9 1050 aaKnown RBP12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Idh1O88844 414 aaKnown RBP12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 CopeO89079 308 aa12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Eps15P42567 897 aa12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Gm5168Q4KL04 211 aa12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Xlr3aQ60595 226 aa12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 E2f7Q6S7F2 904 aa12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 PhkbQ7TSH2 1085 aa12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Depdc1bQ8BH88 529 aa12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Heatr3Q8BQM4 679 aa12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Ces4aQ8R0W5 563 aa12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Pstpip2Q99M15 334 aa12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Josd2Q9CR30 188 aa12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Ssu72Q9CY97 194 aaKnown RBP12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Slc15a2Q9ES07 729 aa12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 PnkpQ9JLV6 522 aaKnown RBP12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Ror2Q9Z138 944 aa12.83□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Usp34Q6ZQ93 3582 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Mia3Q8BI84 1930 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Trpm7Q923J1 1863 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Lrriq4A6H6A4 596 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Gm4907B1AXB9 411 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Mroh5E9PUJ8 762 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Tnfrsf11aO35305 625 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Stat3P42227 770 aaKnown RBP12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Cntn3Q07409 1028 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Aars2Q14CH7 980 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 GmpsQ3THK7 693 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Dzip1lQ499E4 774 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Oxr1Q4KMM3 866 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Pdp2Q504M2 532 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Grb10Q60760 621 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Birc2Q62210 612 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Zcchc2Q69ZB8 1166 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Cdc14aQ6GQT0 603 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Ptrh1Q8BW00 204 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 TdrpQ8C5P7 182 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Znf830Q8R1N0 363 aaKnown RBP12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Pde6cQ91ZQ1 861 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Spc24Q9D083 201 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Fam111aQ9D2L9 613 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Rbm31yQ9D3U4 565 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Lrp2bpQ9D4C6 346 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Spata1Q9D5R4 444 aa12.82□□□□□ -0.36
Ufd1-201ENSMUST00000005394 Serpina9Q9D7D2 418 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms