RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 SpertQ32MG2 446 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Stk38lQ7TSE6 464 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Sestd1Q80UK0 696 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Bri3bpQ8BXV2 253 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Actl9Q8CG27 415 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Ccdc137Q8R0K4 290 aaKnown RBP17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Lpgat1Q91YX5 370 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Gbp7Q91Z40 638 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 IqcdQ9D3V1 458 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Ptgdr2Q9Z2J6 382 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Lrrc74aA0A1Y7VMD6 494 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 GzmgP13366 248 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Bpifb5Q3UQ05 490 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 AcrbpQ3V140 540 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Uts2bQ765I1 113 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 B4galnt4Q766D5 1034 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Slc26a7Q8R2Z3 656 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Npm3Q9CPP0 175 aaKnown RBP17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Zcchc8Q9CYA6 709 aaKnown RBP17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Tacc3Q9JJ11 631 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Drg2Q9QXB9 364 aaKnown RBP17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Zswim8Q3UHH1 1832 aaKnown RBP17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 PatjQ63ZW7 1834 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 4933406M09RikG3XA12 479 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Rgsl1H3BL40 1073 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Nrg3O35181 713 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Wfs1P56695 890 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Aars2Q14CH7 980 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Kbtbd13Q8C828 458 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 C130026I21RikQ8C898 291 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Fbxo43Q8CDI2 640 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Sec14l2Q99J08 403 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Rabgef1Q9JM13 491 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 SufuQ9Z0P7 484 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Ripor3A1L3T7 938 aa17.52■□□□□ 0.4
Shh-201ENSMUST00000002708 Olfr552E9Q545 317 aa17.52■□□□□ 0.4
Shh-201ENSMUST00000002708 Diaph2O70566 1098 aa17.52■□□□□ 0.4
Shh-201ENSMUST00000002708 Irf8P23611 424 aa17.52■□□□□ 0.4
Shh-201ENSMUST00000002708 Ksr1Q61097 873 aa17.52■□□□□ 0.4
Shh-201ENSMUST00000002708 Ccdc169Q8BXX9 214 aa17.52■□□□□ 0.4
Shh-201ENSMUST00000002708 Tmem161bQ8C2L6 487 aa17.52■□□□□ 0.4
Shh-201ENSMUST00000002708 NcaldQ91X97 193 aa17.52■□□□□ 0.4
Shh-201ENSMUST00000002708 Serpinb3bQ9D1Q5 387 aa17.52■□□□□ 0.4
Shh-201ENSMUST00000002708 Rbm31yQ9D3U4 565 aa17.52■□□□□ 0.4
Shh-201ENSMUST00000002708 Q9DA42 136 aa17.52■□□□□ 0.4
Shh-201ENSMUST00000002708 XdhQ00519 1335 aa17.52■□□□□ 0.4
Shh-201ENSMUST00000002708 Wnt7bP28047 349 aa17.52■□□□□ 0.39
Shh-201ENSMUST00000002708 Syne3Q4FZC9 975 aa17.52■□□□□ 0.39
Shh-201ENSMUST00000002708 Retreg2Q6NS82 541 aa17.52■□□□□ 0.39
Shh-201ENSMUST00000002708 Uroc1Q8VC12 676 aa17.52■□□□□ 0.39
Shh-201ENSMUST00000002708 Tgm5Q9D7I9 724 aa17.52■□□□□ 0.39
Shh-201ENSMUST00000002708 Sucla2Q9Z2I9 463 aa17.52■□□□□ 0.39
Shh-201ENSMUST00000002708 Bmp2P21274 394 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Palb2Q3U0P1 1104 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Klhl11Q8CE33 709 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Nxf1Q99JX7 618 aaKnown RBP17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Igf2bp3Q9CPN8 579 aaKnown RBP17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Prss23Q9D6X6 382 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Gm5936A2BG95 728 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Gm5640A3KG49 728 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Rap1gds1E9Q912 607 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 A1cfQ5YD48 595 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Vav2Q60992 868 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Pla2g4cQ64GA5 597 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Q6DFW0 481 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 PrimpolQ6P1E7 537 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Ipo5Q8BKC5 1097 aaKnown RBP17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 PreplQ8C167 725 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Inpp5fQ8CDA1 1132 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Trappc12Q8K2L8 797 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Znf445Q8R2V3 986 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Vps36Q91XD6 386 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 PawrQ925B0 333 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Fgfr1op2Q9CRA9 253 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Thumpd2Q9CZB3 528 aa17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Myo5aQ99104 1853 aaKnown RBP17.51■□□□□ 0.39
Shh-201ENSMUST00000002708 Gm21973F6WEZ7 68 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Xrcc5P27641 732 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 GmncQ3URY2 333 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Cnot7Q60809 285 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Cyp3a11Q64459 504 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Sec23ipQ6NZC7 998 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Nsun6Q7TS68 476 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 SnphQ80U23 495 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Rhbdf2Q80WQ6 827 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Q8BGC1 442 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 EtnpplQ8BWU8 499 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Sh3rf3Q8C120 878 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Trmt10bQ9D075 318 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 PrameQ9D4Z5 464 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 IkbipQ9DBZ1 373 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 MesdQ9ERE7 224 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Mpp2Q9WV34 552 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Apol7bB1AQP7 369 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Unc13dB2RUP2 1085 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 DgkhD3YXJ0 1156 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Wdr95D3Z7A8 784 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Map4k1P70218 827 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Yipf3Q3UDR8 347 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Q3UTZ3 580 aa17.5■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms