RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 SUCLA2Q9P2R7 463 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-228ENST00000641847 DACH1Q9UI36 760 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 SORCS3Q9UPU3 1222 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 AKT3Q9Y243 479 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 PCDHA2Q9Y5H9 948 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 KMT2EQ8IZD2 1858 aa10.32□□□□□ -0.76
PHGDH-228ENST00000641847 SMIM35A0A1B0GVV1 85 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 MED19A0JLT2 244 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-228ENST00000641847 CCDC169A6NNP5 214 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 SLC16A4O15374 487 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 GCNT3O95395 438 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 ITGB1P05556 798 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 STAG3L1P0CL83 205 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 MAPTP10636 758 aaKnown RBP10.31□□□□□ -0.76
PHGDH-228ENST00000641847 NMT1P30419 496 aaKnown RBP10.31□□□□□ -0.76
PHGDH-228ENST00000641847 NAMPTP43490 491 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 CASP5P51878 434 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 NCKAP1LP55160 1127 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 ADAM17P78536 824 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 UBE3AQ05086 875 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 LAMTOR4Q0VGL1 99 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 STIM1Q13586 685 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 CAPSQ13938 189 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 CAMK1Q14012 370 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 MXD4Q14582 209 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-228ENST00000641847 PPP2R5AQ15172 486 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 ANO6Q4KMQ2 910 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 L1TD1Q5T7N2 865 aaKnown RBP10.31□□□□□ -0.76
PHGDH-228ENST00000641847 PDE12Q6L8Q7 609 aaKnown RBP10.31□□□□□ -0.76
PHGDH-228ENST00000641847 C11orf57Q6ZUT1 292 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-228ENST00000641847 RHPN2Q8IUC4 686 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 KSR1Q8IVT5 923 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 CMTR2Q8IYT2 770 aaKnown RBP10.31□□□□□ -0.76
PHGDH-228ENST00000641847 TMEM105Q8N8V8 129 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 KLHL23Q8NBE8 558 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 GLIS3Q8NEA6 775 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 SPPL3Q8TCT6 385 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 PRPF31Q8WWY3 499 aaKnown RBP10.31□□□□□ -0.76
PHGDH-228ENST00000641847 SUSD6Q92537 303 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 NLRP4Q96MN2 994 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 FIZ1Q96SL8 496 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 HINFPQ9BQA5 517 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 CTNND2Q9UQB3 1225 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 PCDHB12Q9Y5F1 795 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 CHD8Q9HCK8 2581 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 RALGAPA2Q2PPJ7 1873 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 EVPLQ92817 2033 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 UBE4BO95155 1302 aa10.31□□□□□ -0.76
PHGDH-228ENST00000641847 ACACBO00763 2458 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 LRRIQ4A6NIV6 560 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 H0YCG3 227 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 ENPP3O14638 875 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 EIF3DO15371 548 aaKnown RBP eCLIP10.3□□□□□ -0.76
PHGDH-228ENST00000641847 DGKIO75912 1065 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 KRT37O76014 449 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 LMNAP02545 664 aaKnown RBP10.3□□□□□ -0.76
PHGDH-228ENST00000641847 VTNP04004 478 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 LINC00271P0C7V0 271 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 CD44P16070 742 aaKnown RBP10.3□□□□□ -0.76
PHGDH-228ENST00000641847 HOXB8P17481 243 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-228ENST00000641847 PPP1R2P41236 205 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 PRCPP42785 496 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 SMTNP53814 917 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 ALCAMQ13740 583 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 TFDP1Q14186 410 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 COBLL1Q53SF7 1204 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 FAM26DQ5JW98 314 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 SPOUT1Q5T280 376 aaKnown RBP10.3□□□□□ -0.76
PHGDH-228ENST00000641847 CES5AQ6NT32 575 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 TAF2Q6P1X5 1199 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 STXBP4Q6ZWJ1 553 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 EPM2AIP1Q7L775 607 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-228ENST00000641847 KIAA0319LQ8IZA0 1049 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 MLKLQ8NB16 471 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 RNF149Q8NC42 400 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 DEPTORQ8TB45 409 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 SCFD1Q8WVM8 642 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 DNAJB3Q8WWF6 145 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 ZNF689Q96CS4 500 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-228ENST00000641847 RMDN1Q96DB5 314 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 ZNF668Q96K58 619 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-228ENST00000641847 NECTIN4Q96NY8 510 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 PPP1R16BQ96T49 567 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 RC3H2Q9HBD1 1191 aaKnown RBP10.3□□□□□ -0.76
PHGDH-228ENST00000641847 MAPK8IP1Q9UQF2 711 aa10.3□□□□□ -0.76
PHGDH-228ENST00000641847 MRPL42Q9Y6G3 142 aaKnown RBP10.3□□□□□ -0.76
PHGDH-228ENST00000641847 ZMYM2Q9UBW7 1377 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 DENND3A2RUS2 1198 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 PPP1R3GB7ZBB8 358 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 PSMA7O14818 248 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 PER2O15055 1255 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 ASAP2O43150 1006 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 PPP1R37O75864 691 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 PRPF6O94906 941 aaKnown RBP10.29□□□□□ -0.76
PHGDH-228ENST00000641847 KIF20AO95235 890 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 GLP2RO95838 553 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 RPLP2P05387 115 aaKnown RBP10.29□□□□□ -0.76
PHGDH-228ENST00000641847 SRGAP2CP0DJJ0 459 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 GHRP10912 638 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms