RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 TISP43B9A030 160 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 TACC1O75410 805 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 ERLIN2O94905 339 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 ZNF286BP0CG31 522 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 TNNI1P19237 187 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 PSEN2P49810 448 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 CLCN3P51790 818 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 PRMT2P55345 433 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 GJA9P57773 515 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 SP3Q02447 781 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 MBTD1Q05BQ5 628 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 MKRN4PQ13434 485 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-215ENST00000641371 MFSD10Q14728 455 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 DRAP1Q14919 205 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-215ENST00000641371 DCAF4L1Q3SXM0 396 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 ZNF568Q3ZCX4 644 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 ZACNQ401N2 412 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 TAF2Q6P1X5 1199 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 NFRKBQ6P4R8 1299 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 C15orf39Q6ZRI6 1047 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 SV2AQ7L0J3 742 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 IRF2BP2Q7Z5L9 587 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 LMO3Q8TAP4 145 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 SECISBP2LQ93073 1101 aaKnown RBP10.51□□□□□ -0.73
PHGDH-215ENST00000641371 CCDC127Q96BQ5 260 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 NAPGQ99747 312 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-215ENST00000641371 GCOM2Q9BZD3 368 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-215ENST00000641371 UPF3AQ9H1J1 476 aaKnown RBP10.51□□□□□ -0.73
PHGDH-215ENST00000641371 IKZF4Q9H2S9 585 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 LZTFL1Q9NQ48 299 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 C1orf112Q9NSG2 853 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 ANKFY1Q9P2R3 1169 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 TSKSQ9UJT2 592 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 A0A0A6YYK5 440 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-215ENST00000641371 DYNC1I1O14576 645 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 SEPT4O43236 478 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 EVI5O60447 810 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 B4GALT4O60513 344 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 CLTAP09496 248 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 DLATP10515 647 aaKnown RBP10.5□□□□□ -0.73
PHGDH-215ENST00000641371 RARBP10826 455 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 ACTN1P12814 892 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 CYBAP13498 195 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 CYP2C19P33261 490 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 ARHGAP25P42331 645 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 APLP1P51693 650 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 NLRP11P59045 1033 aaKnown RBP10.5□□□□□ -0.73
PHGDH-215ENST00000641371 YWHAEP62258 255 aaKnown RBP10.5□□□□□ -0.73
PHGDH-215ENST00000641371 IGBP1P78318 339 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 DLG4P78352 724 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 DRP2Q13474 957 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 FSCN1Q16658 493 aaKnown RBP10.5□□□□□ -0.73
PHGDH-215ENST00000641371 DUOXA2Q1HG44 320 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 KIAA0753Q2KHM9 967 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 C1orf220Q5T0J3 134 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 GJC2Q5T442 439 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-215ENST00000641371 CYP4F22Q6NT55 531 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 FAM43BQ6ZT52 329 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-215ENST00000641371 ZNF677Q86XU0 584 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 NLRP7Q8WX94 980 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 TAF4BQ92750 862 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 ANKRD36BP1Q96IX9 119 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 CAPNS2Q96L46 248 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 SCLT1Q96NL6 688 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 MTG1Q9BT17 334 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-215ENST00000641371 ASB7Q9H672 318 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 RPF1Q9H9Y2 349 aaKnown RBP10.5□□□□□ -0.73
PHGDH-215ENST00000641371 PTPRHQ9HD43 1115 aa10.5□□□□□ -0.73
PHGDH-215ENST00000641371 UBE2TQ9NPD8 197 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-215ENST00000641371 CPSF3Q9UKF6 684 aaKnown RBP10.5□□□□□ -0.73
PHGDH-215ENST00000641371 REXO2Q9Y3B8 237 aaKnown RBP10.5□□□□□ -0.73
PHGDH-215ENST00000641371 C17orf102A2RUQ5 167 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 PHACTR2O75167 634 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 SLU7O95391 586 aaKnown RBP10.49□□□□□ -0.73
PHGDH-215ENST00000641371 TNNC2P02585 160 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 C4BPAP04003 597 aaKnown RBP10.49□□□□□ -0.73
PHGDH-215ENST00000641371 SMIM10L2AP0DMW4 78 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 SMIM10L2BP0DMW5 78 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 PIK3CAP42336 1068 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 MAP2K1Q02750 393 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-215ENST00000641371 BIRC3Q13489 604 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 NAB2Q15742 525 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 ZNF569Q5MCW4 686 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 CRELD2Q6UXH1 353 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-215ENST00000641371 RSPH3Q86UC2 560 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 TTC39CQ8N584 583 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 PLEKHO2Q8TD55 490 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 LMBR1Q8WVP7 490 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 SHC3Q92529 594 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 ERO1AQ96HE7 468 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 NOX5Q96PH1 765 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.49□□□□□ -0.73
PHGDH-215ENST00000641371 IFT122Q9HBG6 1241 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 FLRT1Q9NZU1 646 aa10.49□□□□□ -0.73
PHGDH-215ENST00000641371 A0A087WZ62 844 aa10.48□□□□□ -0.73
PHGDH-215ENST00000641371 UQCRHLA0A096LP55 91 aa10.48□□□□□ -0.73
PHGDH-215ENST00000641371 M0QZ92 97 aa10.48□□□□□ -0.73
PHGDH-215ENST00000641371 ABLIM1O14639 778 aa10.48□□□□□ -0.73
PHGDH-215ENST00000641371 RIOK3O14730 519 aaKnown RBP10.48□□□□□ -0.73
PHGDH-215ENST00000641371 CABYRO75952 493 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms