RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 PBXIP1Q96AQ6 731 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 PGM2Q96G03 612 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 FBXO28Q9NVF7 368 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 DNAJB4Q9UDY4 337 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 FBXL5Q9UKA1 691 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 PCDHA4Q9UN74 947 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 ITM2BQ9Y287 266 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 DTNAQ9Y4J8 743 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 TCP11X1B4DZS4 312 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 CYP27B1O15528 508 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 MT-ND3P03897 115 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 MYCLP12524 364 aaPredicted RBP8.74□□□□□ -1.01
NECAP1-227ENST00000640648 PLCG1P19174 1290 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 NLRP11P59045 1033 aaKnown RBP8.74□□□□□ -1.01
NECAP1-227ENST00000640648 MCL1Q07820 350 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 SCARF1Q14162 830 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 ZC3H12AQ5D1E8 599 aaKnown RBP8.74□□□□□ -1.01
NECAP1-227ENST00000640648 SHQ1Q6PI26 577 aaKnown RBP8.74□□□□□ -1.01
NECAP1-227ENST00000640648 KCTD17Q8N5Z5 321 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 LRRC39Q96DD0 335 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 PARVGQ9HBI0 331 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 AXIN2Q9Y2T1 843 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 WDR17Q8IZU2 1322 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 TRIM43BA6NCK2 446 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 AXIN1O15169 862 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 PHF2O75151 1096 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 RHOBTB1O94844 696 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 IL12AP29459 219 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 KPNA2P52292 529 aaKnown RBP8.74□□□□□ -1.01
NECAP1-227ENST00000640648 LIN52Q52LA3 116 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 TBCKQ8TEA7 893 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 SCG3Q8WXD2 468 aaKnown RBP8.74□□□□□ -1.01
NECAP1-227ENST00000640648 IRGQQ8WZA9 623 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 DYNLL2Q96FJ2 89 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 MMS19Q96T76 1030 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 BRIP1Q9BX63 1249 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.74□□□□□ -1.01
NECAP1-227ENST00000640648 ANLNQ9NQW6 1124 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 ATP8A2Q9NTI2 1148 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 ANAPC5Q9UJX4 755 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 SORCS3Q9UPU3 1222 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 PLEKHG1Q9ULL1 1385 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 SPHKAPQ2M3C7 1700 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 PNMA8CA0A1B0GUJ8 204 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 PFDN6O15212 129 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 IFNB1P01574 187 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 INHBAP08476 426 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 UBTFL6P0CB48 400 aaPredicted RBP8.74□□□□□ -1.01
NECAP1-227ENST00000640648 EEF1B2P24534 225 aaKnown RBP8.74□□□□□ -1.01
NECAP1-227ENST00000640648 KCNQ4P56696 695 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 PABPC4Q13310 644 aaKnown RBP eCLIP8.74□□□□□ -1.01
NECAP1-227ENST00000640648 EXOC3L4Q17RC7 722 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 TC2NQ8N9U0 490 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 MCRS1Q96EZ8 462 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 TULP4Q9NRJ4 1543 aa8.74□□□□□ -1.01
NECAP1-227ENST00000640648 RNF17Q9BXT8 1623 aaKnown RBP8.74□□□□□ -1.01
NECAP1-227ENST00000640648 EXOC1LA0A1B0GW35 172 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 PALM3A6NDB9 673 aaPredicted RBP8.73□□□□□ -1.01
NECAP1-227ENST00000640648 PHF20L1A8MW92 1017 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 USP17L8P0C7I0 530 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 JAK1P23458 1154 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 NR2F2P24468 414 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 CCNE1P24864 410 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 CHN2P52757 468 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 SEC24CP53992 1094 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 POLGP54098 1239 aaPredicted RBP8.73□□□□□ -1.01
NECAP1-227ENST00000640648 PURAQ00577 322 aaKnown RBP8.73□□□□□ -1.01
NECAP1-227ENST00000640648 ART3Q13508 389 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 NR1I3Q14994 352 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 ARHGEF6Q15052 776 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 RABGAP1LQ5R372 815 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 AK8Q96MA6 479 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 WDR12Q9GZL7 423 aaKnown RBP8.73□□□□□ -1.01
NECAP1-227ENST00000640648 AZI2Q9H6S1 392 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 C8orf4Q9NR00 106 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 WBP11Q9Y2W2 641 aaKnown RBP8.73□□□□□ -1.01
NECAP1-227ENST00000640648 PFASO15067 1338 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 HEG1Q9ULI3 1381 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 QRICH2Q9H0J4 1663 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 KDM3AQ9Y4C1 1321 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 A0A087WXM4 84 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 FAM47DPA6NHR8 397 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 M0QX08 132 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 KRT16P08779 473 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 SP100P23497 879 aaPredicted RBP8.73□□□□□ -1.01
NECAP1-227ENST00000640648 GRM1Q13255 1194 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 ADCK1Q86TW2 530 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 CDKL2Q92772 493 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 PPWD1Q96BP3 646 aaKnown RBP8.73□□□□□ -1.01
NECAP1-227ENST00000640648 RPS6KC1Q96S38 1066 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 LRRC1Q9BTT6 524 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 CDC42BPBQ9Y5S2 1711 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 CENPBD1B2RD01 187 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 GNL1P36915 607 aaPredicted RBP8.73□□□□□ -1.01
NECAP1-227ENST00000640648 BTDP43251 543 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 SCNN1DP51172 638 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 HLFQ16534 295 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 FAM98CQ17RN3 349 aaKnown RBP8.73□□□□□ -1.01
NECAP1-227ENST00000640648 TSGA10IPQ3SY00 556 aa8.73□□□□□ -1.01
NECAP1-227ENST00000640648 USP17L2Q6R6M4 530 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms