RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 UBN1Q9NPG3 1134 aa23.51■■□□□ 1.35
TSPAN9-208ENST00000640568 TDRD15B5MCY1 1934 aaKnown RBP23.51■■□□□ 1.35
TSPAN9-208ENST00000640568 GOLGA8IPA6NC78 632 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 GOLGA8JA6NMD2 632 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 TULP1O00294 542 aaPredicted RBP23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 HOXA2O43364 376 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 EXTL3O43909 919 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 CLTAP09496 248 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 AKAP5P24588 427 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 ERCC5P28715 1186 aaPredicted RBP23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 ACOT2P49753 483 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 PMS1P54277 932 aaKnown RBP23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 FKBP3Q00688 224 aaKnown RBP23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 ADAM9Q13443 819 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 MYBPC2Q14324 1141 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 NFIL3Q16649 462 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 TPD52L1Q16890 204 aaPredicted RBP23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 CEP135Q66GS9 1140 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 SLC9A9Q8IVB4 645 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 ABI1Q8IZP0 508 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 DNAJC25Q9H1X3 360 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 RPF1Q9H9Y2 349 aaKnown RBP23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 RSAD1Q9HA92 442 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 TOPORSQ9NS56 1045 aaPredicted RBP23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 FRMD4BQ9Y2L6 1034 aa23.5■■□□□ 1.35
TSPAN9-208ENST00000640568 CETN3O15182 167 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 RECQL4O94761 1208 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 ATF7P17544 494 aaPredicted RBP23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 BMP8BP34820 402 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 ANO6Q4KMQ2 910 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 FAM117BQ6P1L5 589 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 ZNF598Q86UK7 904 aaKnown RBP23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 TOP1MTQ969P6 601 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 GIT1Q9Y2X7 761 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 FNDC1Q4ZHG4 1894 aaPredicted RBP23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 ANK1P16157 1881 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 TNFSF9P41273 254 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 FOXR2Q6PJQ5 311 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 CHRDL2Q6WN34 429 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 C11orf57Q6ZUT1 292 aaPredicted RBP23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 RDH13Q8NBN7 331 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 PHOSPHO2Q8TCD6 241 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 RPS6KC1Q96S38 1066 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 ZBED2Q9BTP6 218 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 FUCA2Q9BTY2 467 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 RNF39Q9H2S5 420 aa23.49■■□□□ 1.35
TSPAN9-208ENST00000640568 ZNF233A6NK53 670 aa23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 FGFR1OPO95684 399 aaKnown RBP23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 ATP2A2P16615 1042 aaKnown RBP23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 PPP2R3AQ06190 1150 aa23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 ZBTB41Q5SVQ8 909 aa23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 TTI2Q6NXR4 508 aa23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 GLB1LQ6UWU2 654 aa23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 AGMOQ6ZNB7 445 aa23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 TMEM192Q8IY95 271 aa23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 CSGALNACT2Q8N6G5 542 aa23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 ZSWIM2Q8NEG5 633 aa23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 TMEM174Q8WUU8 243 aa23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 FAM212AQ96EL1 285 aa23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 DMAC2Q9NW81 257 aa23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 RBAKQ9NYW8 714 aaPredicted RBP23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 CPSF3Q9UKF6 684 aaKnown RBP23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 PDCD11Q14690 1871 aaKnown RBP23.48■■□□□ 1.35
TSPAN9-208ENST00000640568 MEIS3P2A8K0S8 358 aa23.47■■□□□ 1.35
TSPAN9-208ENST00000640568 FAM189A1O60320 539 aa23.47■■□□□ 1.35
TSPAN9-208ENST00000640568 CXCL8P10145 99 aa23.47■■□□□ 1.35
TSPAN9-208ENST00000640568 FGFR1P11362 822 aa23.47■■□□□ 1.35
TSPAN9-208ENST00000640568 SNRNP35Q16560 246 aaKnown RBP23.47■■□□□ 1.35
TSPAN9-208ENST00000640568 RASIP1Q5U651 963 aa23.47■■□□□ 1.35
TSPAN9-208ENST00000640568 TMCO2Q7Z6W1 182 aaPredicted RBP23.47■■□□□ 1.35
TSPAN9-208ENST00000640568 HELQQ8TDG4 1101 aa23.47■■□□□ 1.35
TSPAN9-208ENST00000640568 KLK14Q9P0G3 267 aa23.47■■□□□ 1.35
TSPAN9-208ENST00000640568 INPP5FQ9Y2H2 1132 aa23.47■■□□□ 1.35
TSPAN9-208ENST00000640568 EPB41P11171 864 aaKnown RBP23.46■■□□□ 1.35
TSPAN9-208ENST00000640568 MLH1P40692 756 aa23.46■■□□□ 1.35
TSPAN9-208ENST00000640568 CBWD2Q8IUF1 395 aa23.46■■□□□ 1.35
TSPAN9-208ENST00000640568 TDHQ8IZJ6 230 aa23.46■■□□□ 1.35
TSPAN9-208ENST00000640568 URGCPQ8TCY9 931 aa23.46■■□□□ 1.35
TSPAN9-208ENST00000640568 FBXL18Q96ME1 805 aa23.46■■□□□ 1.35
TSPAN9-208ENST00000640568 YME1L1Q96TA2 773 aa23.46■■□□□ 1.35
TSPAN9-208ENST00000640568 ANP32EQ9BTT0 268 aa23.46■■□□□ 1.35
TSPAN9-208ENST00000640568 GBF1Q92538 1859 aa23.45■■□□□ 1.35
TSPAN9-208ENST00000640568 PSMC2P35998 433 aaKnown RBP23.45■■□□□ 1.34
TSPAN9-208ENST00000640568 POU5F1Q01860 360 aaKnown RBP23.45■■□□□ 1.34
TSPAN9-208ENST00000640568 LRSAM1Q6UWE0 723 aa23.45■■□□□ 1.34
TSPAN9-208ENST00000640568 CRELD2Q6UXH1 353 aaPredicted RBP23.45■■□□□ 1.34
TSPAN9-208ENST00000640568 HERC6Q8IVU3 1022 aa23.45■■□□□ 1.34
TSPAN9-208ENST00000640568 BRSK2Q8IWQ3 736 aa23.45■■□□□ 1.34
TSPAN9-208ENST00000640568 RSPH1Q8WYR4 309 aa23.45■■□□□ 1.34
TSPAN9-208ENST00000640568 EEF2KMTQ96G04 330 aa23.45■■□□□ 1.34
TSPAN9-208ENST00000640568 SNX27Q96L92 541 aa23.45■■□□□ 1.34
TSPAN9-208ENST00000640568 CEP63Q96MT8 703 aa23.45■■□□□ 1.34
TSPAN9-208ENST00000640568 GAD1Q99259 594 aa23.45■■□□□ 1.34
TSPAN9-208ENST00000640568 DUSP9Q99956 384 aaKnown RBP23.45■■□□□ 1.34
TSPAN9-208ENST00000640568 ARL5CA6NH57 179 aa23.44■■□□□ 1.34
TSPAN9-208ENST00000640568 TBKBP1A7MCY6 615 aa23.44■■□□□ 1.34
TSPAN9-208ENST00000640568 DGKIO75912 1065 aa23.44■■□□□ 1.34
TSPAN9-208ENST00000640568 GJB5O95377 273 aa23.44■■□□□ 1.34
TSPAN9-208ENST00000640568 CASP4P49662 377 aa23.44■■□□□ 1.34
TSPAN9-208ENST00000640568 ENOX2Q16206 610 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms