RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 FAM153BP0C7A2 387 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 FCER1AP12319 257 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 VAV1P15498 845 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 RASA1P20936 1047 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 KCNH2Q12809 1159 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 FOXD4Q12950 439 aaPredicted RBP6.03□□□□□ -1.44
SCARB2-218ENST00000639715 STK4Q13043 487 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 CNPY1Q3B7I2 92 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 FAM153CQ494X1 144 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 PAPD7Q5XG87 772 aaKnown RBP6.03□□□□□ -1.44
SCARB2-218ENST00000639715 RFX8Q6ZV50 586 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 FRMD5Q7Z6J6 570 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 UBE2Q1Q7Z7E8 422 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 KCTD17Q8N5Z5 321 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 GRK7Q8WTQ7 553 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 UCMAQ8WVF2 138 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 SCG3Q8WXD2 468 aaKnown RBP6.03□□□□□ -1.44
SCARB2-218ENST00000639715 SYN2Q92777 582 aaPredicted RBP6.03□□□□□ -1.44
SCARB2-218ENST00000639715 LRRC37BQ96QE4 947 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 CPVLQ9H3G5 476 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 FGFR1OP2Q9NVK5 253 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 NDUFA13Q9P0J0 144 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 PKD2L1Q9P0L9 805 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 GCNT4Q9P109 453 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 SEL1LQ9UBV2 794 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 FAM153AQ9UHL3 310 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 ABCA3Q99758 1704 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 K7ENM7 598 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 PALMO75781 387 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 ABL1P00519 1130 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 NPR1P16066 1061 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 MAN1A1P33908 653 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 OXCT1P55809 520 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 KCNQ4P56696 695 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 BTKQ06187 659 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 PPIDQ08752 370 aaKnown RBP6.03□□□□□ -1.44
SCARB2-218ENST00000639715 STRN3Q13033 797 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 MED21Q13503 144 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 CYTH1Q15438 398 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 KNOP1Q1ED39 458 aaKnown RBP6.03□□□□□ -1.44
SCARB2-218ENST00000639715 MARCH10Q8NA82 808 aaPredicted RBP6.03□□□□□ -1.44
SCARB2-218ENST00000639715 RDH13Q8NBN7 331 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 BBOF1Q8ND07 529 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 JDP2Q8WYK2 163 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 FERMT1Q9BQL6 677 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 TMEM60Q9H2L4 133 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 RBM12Q9NTZ6 932 aaKnown RBP6.03□□□□□ -1.44
SCARB2-218ENST00000639715 TBC1D23Q9NUY8 699 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 MTMR4Q9NYA4 1195 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 PLAGL2Q9UPG8 496 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 DOLKQ9UPQ8 538 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 TRAF3IP3Q9Y228 551 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 PDE2AO00408 941 aaPredicted RBP6.03□□□□□ -1.44
SCARB2-218ENST00000639715 TRPA1O75762 1119 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 HARSP12081 509 aaKnown RBP6.03□□□□□ -1.44
SCARB2-218ENST00000639715 PRLRP16471 622 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 DRD4P21917 467 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 HSPA9P38646 679 aaKnown RBP6.03□□□□□ -1.44
SCARB2-218ENST00000639715 NCALDP61601 193 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 SPRED3Q2MJR0 410 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 C1orf228Q6PIY5 440 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 RHOT2Q8IXI1 618 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 KIAA2013Q8IYS2 634 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 ANKS1AQ92625 1134 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 ACCSQ96QU6 501 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 PITPNM3Q9BZ71 974 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 MLXIPQ9HAP2 919 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 AGPAT5Q9NUQ2 364 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 TYW1Q9NV66 732 aaKnown RBP6.03□□□□□ -1.44
SCARB2-218ENST00000639715 TMEM260Q9NX78 707 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 TRIM33Q9UPN9 1127 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 RIC1Q4ADV7 1423 aa6.03□□□□□ -1.44
SCARB2-218ENST00000639715 CICQ96RK0 1608 aaPredicted RBP6.03□□□□□ -1.44
SCARB2-218ENST00000639715 GPR75-ASB3A0A0A6YYF3 556 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 WDR91A4D1P6 747 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 PDXKO00764 312 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 TBX3O15119 743 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 SPTLC1O15269 473 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 ASAP2O43150 1006 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 NCK2O43639 380 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 TDP2O95551 362 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 FLT3P36888 993 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 HSD17B3P37058 310 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 MFAP3P55082 362 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 ARHGAP4P98171 946 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 CACNB1Q02641 598 aaPredicted RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 KIF22Q14807 665 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 EDRF1Q3B7T1 1238 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 TMCO4Q5TGY1 634 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 PPP1R2P3Q6NXS1 205 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 PODNQ7Z5L7 613 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 NLRX1Q86UT6 975 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 IQCKQ8N0W5 287 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 RBM46Q8TBY0 533 aaKnown RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 POLR3CQ9BUI4 534 aaPredicted RBP6.02□□□□□ -1.45
SCARB2-218ENST00000639715 FAM129AQ9BZQ8 928 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 CYP39A1Q9NYL5 469 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 EHD2Q9NZN4 543 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 CCPG1Q9ULG6 757 aa6.02□□□□□ -1.45
SCARB2-218ENST00000639715 HTR3EA5X5Y0 456 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms