RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 DDX25Q9UHL0 483 aaKnown RBP6.14□□□□□ -1.43
PDE4D-229ENST00000638939 DPP7Q9UHL4 492 aa6.14□□□□□ -1.43
PDE4D-229ENST00000638939 SSX2IPQ9Y2D8 614 aa6.14□□□□□ -1.43
PDE4D-229ENST00000638939 INPP5FQ9Y2H2 1132 aa6.14□□□□□ -1.43
PDE4D-229ENST00000638939 PCDHB2Q9Y5E7 798 aa6.14□□□□□ -1.43
PDE4D-229ENST00000638939 COL4A3BPQ9Y5P4 624 aa6.14□□□□□ -1.43
PDE4D-229ENST00000638939 EPG5Q9HCE0 2579 aa6.14□□□□□ -1.43
PDE4D-229ENST00000638939 CLUHO75153 1309 aa6.14□□□□□ -1.43
PDE4D-229ENST00000638939 CACNA1BQ00975 2339 aa6.14□□□□□ -1.43
PDE4D-229ENST00000638939 OBSL1O75147 1896 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 TCHHQ07283 1943 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 TBX3O15119 743 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 SLC37A4O43826 429 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 DDHD2O94830 711 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 REC8O95072 547 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 FBXO45P0C2W1 286 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 NPR3P17342 541 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 NCLP19338 710 aaKnown RBP6.13□□□□□ -1.43
PDE4D-229ENST00000638939 AXLP30530 894 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 HOXA11P31270 313 aaPredicted RBP6.13□□□□□ -1.43
PDE4D-229ENST00000638939 GLUD2P49448 558 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 DSC1Q08554 894 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 NONOQ15233 471 aaKnown RBP eCLIP6.13□□□□□ -1.43
PDE4D-229ENST00000638939 UBXN11Q5T124 520 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 PPP4R3AQ6IN85 833 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 ERMP1Q7Z2K6 904 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 FRMD5Q7Z6J6 570 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 ZNF280BQ86YH2 543 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 KSR1Q8IVT5 923 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 C4orf19Q8IY42 314 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 CNNM3Q8NE01 707 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 ANKK1Q8NFD2 765 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 EPS8L1Q8TE68 723 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 HDAC7Q8WUI4 952 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 TCP11Q8WWU5 503 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 STAMQ92783 540 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 NKD2Q969F2 451 aaPredicted RBP6.13□□□□□ -1.43
PDE4D-229ENST00000638939 GJA10Q969M2 543 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 NXPE3Q969Y0 559 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 ZFRQ96KR1 1074 aaKnown RBP6.13□□□□□ -1.43
PDE4D-229ENST00000638939 KLHL5Q96PQ7 755 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 RPS6KC1Q96S38 1066 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 RTP3Q9BQQ7 232 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 GBP3Q9H0R5 595 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 KCNK12Q9HB15 430 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 NCOA5Q9HCD5 579 aaKnown RBP6.13□□□□□ -1.43
PDE4D-229ENST00000638939 WDR6Q9NNW5 1121 aaKnown RBP6.13□□□□□ -1.43
PDE4D-229ENST00000638939 UBN1Q9NPG3 1134 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 MAN1C1Q9NR34 630 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 ZDHHC7Q9NXF8 308 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 EPS15L1Q9UBC2 864 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 STK36Q9NRP7 1315 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 COL4A3Q01955 1670 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 KIAA1549LQ6ZVL6 1849 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 GREB1Q4ZG55 1949 aa6.13□□□□□ -1.43
PDE4D-229ENST00000638939 ZNF638Q14966 1978 aaKnown RBP6.13□□□□□ -1.43
PDE4D-229ENST00000638939 LAMA1P25391 3075 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 ACACBO00763 2458 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 NRP1O14786 923 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 SPTBN2O15020 2390 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 ASAP2O43150 1006 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 TSPAN1O60635 241 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 N4BP1O75113 896 aaKnown RBP6.12□□□□□ -1.43
PDE4D-229ENST00000638939 ERLIN2O94905 339 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 GLUD1P00367 558 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 P4HBP07237 508 aaKnown RBP6.12□□□□□ -1.43
PDE4D-229ENST00000638939 SRFP11831 508 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 F5P12259 2224 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 TPRP12270 2363 aaKnown RBP6.12□□□□□ -1.43
PDE4D-229ENST00000638939 JUNDP17535 347 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 KLRC2P26717 231 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 YWHABP31946 246 aaKnown RBP6.12□□□□□ -1.43
PDE4D-229ENST00000638939 CTHP32929 405 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 MLH1P40692 756 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 DSG1Q02413 1049 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 CREMQ03060 361 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 POU5F1BQ06416 359 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 SSRP1Q08945 709 aaKnown RBP6.12□□□□□ -1.43
PDE4D-229ENST00000638939 SPIRE1Q08AE8 756 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 LAMTOR4Q0VGL1 99 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 TOB2Q14106 344 aaPredicted RBP6.12□□□□□ -1.43
PDE4D-229ENST00000638939 MXD4Q14582 209 aaPredicted RBP6.12□□□□□ -1.43
PDE4D-229ENST00000638939 EMC2Q15006 297 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 ANGPT1Q15389 498 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 LONRF3Q496Y0 759 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 KANK3Q6NY19 840 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 NOTUMQ6P988 496 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 GPR179Q6PRD1 2367 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 CPLX2Q6PUV4 134 aaKnown RBP6.12□□□□□ -1.43
PDE4D-229ENST00000638939 RUFY3Q7L099 469 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 NEK8Q86SG6 692 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 FERMT3Q86UX7 667 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 SKAP1Q86WV1 359 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 COLGALT2Q8IYK4 626 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 SIX5Q8N196 739 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 DTWD2Q8NBA8 298 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 SMG8Q8ND04 991 aaKnown RBP6.12□□□□□ -1.43
PDE4D-229ENST00000638939 FLCNQ8NFG4 579 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 FEZF2Q8TBJ5 459 aa6.12□□□□□ -1.43
PDE4D-229ENST00000638939 PRPF31Q8WWY3 499 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms