RNA–Protein interactions for RNA: ENST00000638575.1

KCNMA1-240, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-240ENST00000638575 TOP1MTQ969P6 601 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 SNX27Q96L92 541 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 PRDM5Q9NQX1 630 aaPredicted RBP11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 ANO10Q9NW15 660 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 MIOSQ9NXC5 875 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 PLAGL2Q9UPG8 496 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 HES2Q9Y543 173 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 HNRNPDLO14979 420 aaKnown RBP11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 OGTO15294 1046 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 SEZ6Q53EL9 994 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 C9orf50Q5SZB4 431 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 SLC24A5Q71RS6 500 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 CBWD2Q8IUF1 395 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 CBX8Q9HC52 389 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 ABHD14A-ACY1A0A1B0GW23 586 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 H0YGN5 161 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 AP5Z1O43299 807 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 EXTL3O43909 919 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 NPTXRO95502 500 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 STRN3Q13033 797 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 MIIPQ5JXC2 388 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 ZNF365Q70YC5 407 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 DEFB128Q7Z7B8 93 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 SP7Q8TDD2 431 aaPredicted RBP11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 CASD1Q96PB1 797 aa11.16□□□□□ -0.62
KCNMA1-240ENST00000638575 LRRC10BA6NIK2 292 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 OFD1O75665 1012 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 PPIGQ13427 754 aaKnown RBP eCLIP11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 EFCAB13Q8IY85 973 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 SEPT8Q92599 483 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 CEP63Q96MT8 703 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 PPP1R10Q96QC0 940 aaKnown RBP11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 MKNK1Q9BUB5 465 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 C1orf112Q9NSG2 853 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 EXOC7Q9UPT5 735 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 SLC16A3O15427 465 aaKnown RBP11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 DGKIO75912 1065 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 ERLIN2O94905 339 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 EOMESO95936 686 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 KCNE1P15382 129 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 DLG4P78352 724 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 SPATA1Q5VX52 437 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 FILIP1Q7Z7B0 1213 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 BRSK2Q8IWQ3 736 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 PKNOX2Q96KN3 472 aa11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 AGO2Q9UKV8 859 aaKnown RBP11.15□□□□□ -0.62
KCNMA1-240ENST00000638575 KIAA0391O15091 583 aaKnown RBP11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 CLDN3O15551 220 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 STAG3L1P0CL83 205 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 CCDC192P0DO97 292 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 IGFBP6P24592 240 aaPredicted RBP11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 LIG4P49917 911 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 CYP24A1Q07973 514 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 ZNF568Q3ZCX4 644 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 SLFN12LQ6IEE8 588 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 STXBP4Q6ZWJ1 553 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 TRIM59Q8IWR1 403 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 SAAL1Q96ER3 474 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 PCIF1Q9H4Z3 704 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 SAMSN1Q9NSI8 373 aaKnown RBP11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 TMEM161AQ9NX61 479 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 SNTG2Q9NY99 539 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 PSMA7O14818 248 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 STX17P56962 302 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 PSMD6Q15008 389 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 GPD1LQ8N335 351 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 GOLGA5Q8TBA6 731 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 RAB27AP51159 221 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 FKBP3Q00688 224 aaKnown RBP11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 DSC1Q08554 894 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 NFX1Q12986 1120 aaKnown RBP11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 SNRNP35Q16560 246 aaKnown RBP11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 SASS6Q6UVJ0 657 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 TMCO2Q7Z6W1 182 aaPredicted RBP11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 ZBTB33Q86T24 672 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 LPPQ93052 612 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 THAP9Q9H5L6 903 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 INTS13Q9NVM9 706 aa11.14□□□□□ -0.63
KCNMA1-240ENST00000638575 ARHGEF15O94989 841 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 NR2F2P24468 414 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 ACOT2P49753 483 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 SOX4Q06945 474 aaPredicted RBP11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 XXYLT1Q8NBI6 393 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 PARD3BQ8TEW8 1205 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 CCDC47Q96A33 483 aaKnown RBP11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 RBSNQ9H1K0 784 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 PRUNE2Q8WUY3 3088 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 PTPRDP23468 1912 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 LRRIQ3A6PVS8 624 aaPredicted RBP11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 CALUO43852 315 aaPredicted RBP11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 RECQL4O94761 1208 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 CXCL8P10145 99 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 RPUSD2Q8IZ73 545 aaKnown RBP11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 LMO3Q8TAP4 145 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 SLC35C1Q96A29 364 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 EEF2KMTQ96G04 330 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 FAM84AQ96KN4 292 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 MSTO1Q9BUK6 570 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 CWH43Q9H720 699 aa11.13□□□□□ -0.63
KCNMA1-240ENST00000638575 ANKFY1Q9P2R3 1169 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms