RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 STXBP5LQ9Y2K9 1186 aa12.96□□□□□ -0.33
GFAP-228ENST00000638488 DIS3Q9Y2L1 958 aaKnown RBP12.96□□□□□ -0.33
GFAP-228ENST00000638488 USH1CQ9Y6N9 552 aa12.96□□□□□ -0.33
GFAP-228ENST00000638488 PLIN4Q96Q06 1357 aa12.96□□□□□ -0.34
GFAP-228ENST00000638488 PASKQ96RG2 1323 aa12.96□□□□□ -0.34
GFAP-228ENST00000638488 POTEMA6NI47 508 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 MARCH6O60337 910 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 E2F6O75461 281 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 CYP1A1P04798 512 aaPredicted RBP12.95□□□□□ -0.34
GFAP-228ENST00000638488 ITGA2BP08514 1039 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 EEF2P13639 858 aaKnown RBP12.95□□□□□ -0.34
GFAP-228ENST00000638488 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
GFAP-228ENST00000638488 HOXA7P31268 230 aaPredicted RBP12.95□□□□□ -0.34
GFAP-228ENST00000638488 ASIC1P78348 528 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 PHEXP78562 749 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 IKQ13123 557 aaPredicted RBP12.95□□□□□ -0.34
GFAP-228ENST00000638488 CBX3Q13185 183 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 CLUL1Q15846 466 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 DACT2Q5SW24 774 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 FAM83BQ5T0W9 1011 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 FOXR2Q6PJQ5 311 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 VSTM1Q6UX27 236 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 DAAM2Q86T65 1068 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 SYCE1Q8N0S2 351 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 HPS3Q969F9 1004 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 PACSIN1Q9BY11 444 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 PICK1Q9NRD5 415 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 FAM198AQ9UFP1 575 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 MTRF1LQ9UGC7 380 aaKnown RBP12.95□□□□□ -0.34
GFAP-228ENST00000638488 RASAL2Q9UJF2 1139 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 PAIP2BQ9ULR5 123 aaKnown RBP12.95□□□□□ -0.34
GFAP-228ENST00000638488 ATAD5Q96QE3 1844 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 PNMA6FA0A0J9YX94 578 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 MAPK13O15264 365 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 MAP3K7O43318 606 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 SNHG28P0DPA3 235 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 IDO1P14902 403 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 TARSP26639 723 aaKnown RBP12.95□□□□□ -0.34
GFAP-228ENST00000638488 SMARCA1P28370 1054 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 EPHB2P29323 1055 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 EN1Q05925 392 aaPredicted RBP12.95□□□□□ -0.34
GFAP-228ENST00000638488 STK4Q13043 487 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 STRIP1Q5VSL9 837 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 C4orf50Q6ZRC1 276 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 UNC13DQ70J99 1090 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 SLC35B4Q969S0 331 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 LRRC37BQ96QE4 947 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 ZNF184Q99676 751 aaPredicted RBP12.95□□□□□ -0.34
GFAP-228ENST00000638488 C7orf25Q9BPX7 421 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 KIAA1683Q9H0B3 1180 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 SEMA6BQ9H3T3 888 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.95□□□□□ -0.34
GFAP-228ENST00000638488 RHBDL2Q9NX52 303 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 LNPEPQ9UIQ6 1025 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 HAO1Q9UJM8 370 aa12.95□□□□□ -0.34
GFAP-228ENST00000638488 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.95□□□□□ -0.34
GFAP-228ENST00000638488 RIPK2O43353 540 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 ATP9BO43861 1147 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 ZNF24P17028 368 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 PTPN4P29074 926 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 TMEM62Q0P6H9 643 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 KIAA1755Q5JYT7 1200 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 KLC3Q6P597 504 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 SH3BP5LQ7L8J4 393 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 PEX26Q7Z412 305 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 NME8Q8N427 588 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 TPCN2Q8NHX9 752 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 NRG4Q8WWG1 115 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 CATSPER2Q96P56 530 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 SERPINB12Q96P63 405 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 SMC6Q96SB8 1091 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 TRIM31Q9BZY9 425 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 TRIM9Q9C026 710 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 ASCC2Q9H1I8 757 aaPredicted RBP12.94□□□□□ -0.34
GFAP-228ENST00000638488 RANBP17Q9H2T7 1088 aaKnown RBP12.94□□□□□ -0.34
GFAP-228ENST00000638488 ZNF212Q9UDV6 495 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 TUBGCP4Q9UGJ1 667 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 STARD13Q9Y3M8 1113 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 NRXN2Q9P2S2 1712 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 A0A0A6YYK5 440 aaPredicted RBP12.94□□□□□ -0.34
GFAP-228ENST00000638488 BTBD19C9JJ37 291 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 HNRNPRO43390 633 aaKnown RBP12.94□□□□□ -0.34
GFAP-228ENST00000638488 LGR5O75473 907 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 ZNF189O75820 626 aaPredicted RBP12.94□□□□□ -0.34
GFAP-228ENST00000638488 PABPC4LP0CB38 370 aaKnown RBP12.94□□□□□ -0.34
GFAP-228ENST00000638488 TMEM259Q4ZIN3 620 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 DNAJC14Q6Y2X3 702 aaPredicted RBP12.94□□□□□ -0.34
GFAP-228ENST00000638488 MARK2Q7KZI7 788 aaKnown RBP12.94□□□□□ -0.34
GFAP-228ENST00000638488 MGARPQ8TDB4 240 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 C17orf50Q8WW18 174 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 ARHGEF2Q92974 986 aaKnown RBP12.94□□□□□ -0.34
GFAP-228ENST00000638488 PPP2R3CQ969Q6 453 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 CALML4Q96GE6 196 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 CDK5RAP3Q96JB5 506 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.94□□□□□ -0.34
GFAP-228ENST00000638488 SLX4Q8IY92 1834 aa12.94□□□□□ -0.34
GFAP-228ENST00000638488 ESYT2A0FGR8 921 aa12.93□□□□□ -0.34
GFAP-228ENST00000638488 USP17L15C9J2P7 530 aa12.93□□□□□ -0.34
GFAP-228ENST00000638488 USP17L13C9JLJ4 530 aa12.93□□□□□ -0.34
GFAP-228ENST00000638488 USP17L11C9JVI0 530 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms