RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 USP49Q70CQ1 688 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 ZBTB33Q86T24 672 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 TMEM87AQ8NBN3 555 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 DRC1Q96MC2 740 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 POP1Q99575 1024 aaKnown RBP19.5■□□□□ 0.71
PNKP-230ENST00000638016 PHF7Q9BWX1 381 aaPredicted RBP19.5■□□□□ 0.71
PNKP-230ENST00000638016 CDT1Q9H211 546 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 BLOC1S4Q9NUP1 217 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 C2orf16Q68DN1 1984 aa19.5■□□□□ 0.71
PNKP-230ENST00000638016 VWA8A3KMH1 1905 aa19.49■□□□□ 0.71
PNKP-230ENST00000638016 TECTAO75443 2155 aa19.49■□□□□ 0.71
PNKP-230ENST00000638016 CARNS1A5YM72 827 aa19.49■□□□□ 0.71
PNKP-230ENST00000638016 DCXO43602 365 aa19.49■□□□□ 0.71
PNKP-230ENST00000638016 KIF4AO95239 1232 aa19.49■□□□□ 0.71
PNKP-230ENST00000638016 URODP06132 367 aa19.49■□□□□ 0.71
PNKP-230ENST00000638016 PLCG1P19174 1290 aa19.49■□□□□ 0.71
PNKP-230ENST00000638016 MARCKSP29966 332 aaPredicted RBP19.49■□□□□ 0.71
PNKP-230ENST00000638016 CEBPZQ03701 1054 aaKnown RBP19.49■□□□□ 0.71
PNKP-230ENST00000638016 BMS1Q14692 1282 aaKnown RBP19.49■□□□□ 0.71
PNKP-230ENST00000638016 PTPAQ15257 358 aa19.49■□□□□ 0.71
PNKP-230ENST00000638016 TMEM31Q5JXX7 168 aa19.49■□□□□ 0.71
PNKP-230ENST00000638016 ZBTB45Q96K62 511 aaPredicted RBP19.49■□□□□ 0.71
PNKP-230ENST00000638016 ACO2Q99798 780 aaKnown RBP19.49■□□□□ 0.71
PNKP-230ENST00000638016 NT5C3AQ9H0P0 336 aa19.49■□□□□ 0.71
PNKP-230ENST00000638016 POMKQ9H5K3 350 aa19.49■□□□□ 0.71
PNKP-230ENST00000638016 MRPL17Q9NRX2 175 aaKnown RBP19.49■□□□□ 0.71
PNKP-230ENST00000638016 MTMR6Q9Y217 621 aa19.49■□□□□ 0.71
PNKP-230ENST00000638016 TNFSF13BQ9Y275 285 aa19.49■□□□□ 0.71
PNKP-230ENST00000638016 ZMYM2Q9UBW7 1377 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 ABLIM1O14639 778 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 TEX28O15482 410 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 HARSP12081 509 aaKnown RBP19.48■□□□□ 0.71
PNKP-230ENST00000638016 RPL17P18621 184 aaKnown RBP19.48■□□□□ 0.71
PNKP-230ENST00000638016 KLRC2P26717 231 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 GLUD2P49448 558 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 CLCN4P51793 760 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 TUSC3Q13454 348 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 MCM6Q14566 821 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 DCAF4L1Q3SXM0 396 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 ZNF568Q3ZCX4 644 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 KIAA0319Q5VV43 1072 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 TMC5Q6UXY8 1006 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 GLYCTKQ8IVS8 523 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 COLEC11Q9BWP8 271 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 TMEM134Q9H6X4 195 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 GOLGA2P5Q9HBQ8 144 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 PTPRHQ9HD43 1115 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 GTF3C3Q9Y5Q9 886 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 TRIOO75962 3097 aa19.48■□□□□ 0.71
PNKP-230ENST00000638016 MEFVO15553 781 aaPredicted RBP19.47■□□□□ 0.71
PNKP-230ENST00000638016 PLS3P13797 630 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 HOXB8P17481 243 aaPredicted RBP19.47■□□□□ 0.71
PNKP-230ENST00000638016 UBA7P41226 1012 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 GIT2Q14161 759 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 HSP90AA2PQ14568 343 aaPredicted RBP19.47■□□□□ 0.71
PNKP-230ENST00000638016 TPRNQ4KMQ1 711 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 SEZ6Q53EL9 994 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 GPBP1Q86WP2 473 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 TMEM130Q8N3G9 435 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 TMEM161BQ8NDZ6 487 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 EPSTI1Q96J88 318 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 AK8Q96MA6 479 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 FBXL18Q96ME1 805 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 CLIC6Q96NY7 704 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 REEP2Q9BRK0 252 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 EMILIN2Q9BXX0 1053 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 MRPL4Q9BYD3 311 aaKnown RBP19.47■□□□□ 0.71
PNKP-230ENST00000638016 ADAM7Q9H2U9 754 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 TSHZ2Q9NRE2 1034 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 ADAM28Q9UKQ2 775 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 CITO14578 2027 aa19.47■□□□□ 0.71
PNKP-230ENST00000638016 THP07101 528 aa19.46■□□□□ 0.71
PNKP-230ENST00000638016 PDCP20941 246 aa19.46■□□□□ 0.71
PNKP-230ENST00000638016 DSG1Q02413 1049 aa19.46■□□□□ 0.71
PNKP-230ENST00000638016 RTP2Q5QGT7 225 aa19.46■□□□□ 0.71
PNKP-230ENST00000638016 PRSS55Q6UWB4 352 aaPredicted RBP19.46■□□□□ 0.71
PNKP-230ENST00000638016 CALML4Q96GE6 196 aa19.46■□□□□ 0.71
PNKP-230ENST00000638016 INTS4Q96HW7 963 aaKnown RBP19.46■□□□□ 0.71
PNKP-230ENST00000638016 CHST7Q9NS84 486 aa19.46■□□□□ 0.71
PNKP-230ENST00000638016 FBXO2Q9UK22 296 aaPredicted RBP19.46■□□□□ 0.71
PNKP-230ENST00000638016 DENND4AQ7Z401 1863 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 MYO10Q9HD67 2058 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 MYH15Q9Y2K3 1946 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 GPR37L1O60883 481 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 NR1I2O75469 434 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 TADA2AO75478 443 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 BMP15O95972 392 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 SPATA31D3P0C874 917 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 MAPTP10636 758 aaKnown RBP19.45■□□□□ 0.7
PNKP-230ENST00000638016 ALADP13716 330 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 PROZP22891 400 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 LONP1P36776 959 aaKnown RBP19.45■□□□□ 0.7
PNKP-230ENST00000638016 SOX4Q06945 474 aaPredicted RBP19.45■□□□□ 0.7
PNKP-230ENST00000638016 SPATA31D4Q6ZUB0 917 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 RASSF8Q8NHQ8 419 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 SPIRE2Q8WWL2 714 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 RIN2Q8WYP3 895 aaPredicted RBP19.45■□□□□ 0.7
PNKP-230ENST00000638016 RAD54LQ92698 747 aa19.45■□□□□ 0.7
PNKP-230ENST00000638016 PPP1R10Q96QC0 940 aaKnown RBP19.45■□□□□ 0.7
PNKP-230ENST00000638016 USP28Q96RU2 1077 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms