RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 ANKRD65E5RJM6 399 aa20.2■□□□□ 0.82
CLN5-219ENST00000637537 HARSP12081 509 aaKnown RBP20.2■□□□□ 0.82
CLN5-219ENST00000637537 CKAP4Q07065 602 aaKnown RBP20.2■□□□□ 0.82
CLN5-219ENST00000637537 CCDC62Q6P9F0 684 aa20.2■□□□□ 0.82
CLN5-219ENST00000637537 MMS22LQ6ZRQ5 1243 aa20.2■□□□□ 0.82
CLN5-219ENST00000637537 TADA2BQ86TJ2 420 aa20.2■□□□□ 0.82
CLN5-219ENST00000637537 CCL15-CCL14A0A0B4J2E2 113 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 ZMYND10O75800 440 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 GJB1P08034 283 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 TNFAIP3P21580 790 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 CCL15Q16663 113 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 DNAJC21Q5F1R6 531 aaKnown RBP20.19■□□□□ 0.82
CLN5-219ENST00000637537 GPRC5AQ8NFJ5 357 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 ZNF516Q92618 1163 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 OSGEPQ9NPF4 335 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 ZNF233A6NK53 670 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 ZBTB42B2RXF5 422 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 RNF40O75150 1001 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 MAFO75444 373 aaPredicted RBP20.19■□□□□ 0.82
CLN5-219ENST00000637537 SYF2O95926 243 aaKnown RBP20.19■□□□□ 0.82
CLN5-219ENST00000637537 SRGAP2CP0DJJ0 459 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 TCP1P17987 556 aaKnown RBP20.19■□□□□ 0.82
CLN5-219ENST00000637537 RNASE9P60153 205 aaKnown RBP20.19■□□□□ 0.82
CLN5-219ENST00000637537 MKRN4PQ13434 485 aaPredicted RBP20.19■□□□□ 0.82
CLN5-219ENST00000637537 KIF22Q14807 665 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 ARMCX2Q7L311 632 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 FBXL13Q8NEE6 735 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 TATDN2Q93075 761 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 AGO2Q9UKV8 859 aaKnown RBP20.19■□□□□ 0.82
CLN5-219ENST00000637537 PNMA3Q9UL41 463 aa20.19■□□□□ 0.82
CLN5-219ENST00000637537 H0YCG3 227 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 SGPL1O95470 568 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 PRLRP16471 622 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 RFX1P22670 979 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 ADORA2AP29274 412 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 COPB2P35606 906 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 RFC5P40937 340 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 MEI1Q5TIA1 1274 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 TMC2Q8TDI7 906 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 BRI3BPQ8WY22 251 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 DHX38Q92620 1227 aaKnown RBP20.18■□□□□ 0.82
CLN5-219ENST00000637537 RAB20Q9NX57 234 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 PTPRJQ12913 1337 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 CYP26A1O43174 497 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 CRELD2Q6UXH1 353 aaPredicted RBP20.18■□□□□ 0.82
CLN5-219ENST00000637537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.18■□□□□ 0.82
CLN5-219ENST00000637537 SLC47A2Q86VL8 602 aa20.18■□□□□ 0.82
CLN5-219ENST00000637537 EXTL3O43909 919 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 CALCAP01258 141 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 TNNI1P19237 187 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 ANXA13P27216 316 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 PRPF4BQ13523 1007 aaKnown RBP20.17■□□□□ 0.82
CLN5-219ENST00000637537 CCDC181Q5TID7 509 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 HELQQ8TDG4 1101 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 PSPC1Q8WXF1 523 aaKnown RBP20.17■□□□□ 0.82
CLN5-219ENST00000637537 AGPAT1Q99943 283 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 BTNL10A8MVZ5 291 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 CCDC172P0C7W6 258 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 PLCB4Q15147 1175 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 SPATA4Q8NEY3 305 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 TPCN2Q8NHX9 752 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 THAP2Q9H0W7 228 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 PLEKHA4Q9H4M7 779 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 TRPC6Q9Y210 931 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 COQ4Q9Y3A0 265 aa20.17■□□□□ 0.82
CLN5-219ENST00000637537 DNAH12Q6ZR08 3092 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 PMM2O15305 246 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 MCCD1P59942 119 aaPredicted RBP20.16■□□□□ 0.82
CLN5-219ENST00000637537 KCNV1Q6PIU1 500 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 RPUSD2Q8IZ73 545 aaKnown RBP20.16■□□□□ 0.82
CLN5-219ENST00000637537 LRRC57Q8N9N7 239 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 ARHGEF26Q96DR7 871 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 MSTO1Q9BUK6 570 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 FAM107BQ9H098 131 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 CHORDC1Q9UHD1 332 aaPredicted RBP20.16■□□□□ 0.82
CLN5-219ENST00000637537 ADCY3O60266 1144 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 CETPP11597 493 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 GPC3P51654 580 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 SCARA3Q6AZY7 606 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 NOP9Q86U38 636 aaKnown RBP20.16■□□□□ 0.82
CLN5-219ENST00000637537 RNF149Q8NC42 400 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 ATP8B4Q8TF62 1192 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 FNBP1Q96RU3 617 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 RNPEPQ9H4A4 650 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 STYXL1Q9Y6J8 313 aa20.16■□□□□ 0.82
CLN5-219ENST00000637537 ZC3H4Q9UPT8 1303 aaKnown RBP20.16■□□□□ 0.82
CLN5-219ENST00000637537 LGR5O75473 907 aa20.15■□□□□ 0.82
CLN5-219ENST00000637537 LAMTOR4Q0VGL1 99 aa20.15■□□□□ 0.82
CLN5-219ENST00000637537 TTLL4Q14679 1199 aa20.15■□□□□ 0.82
CLN5-219ENST00000637537 ZBTB33Q86T24 672 aa20.15■□□□□ 0.82
CLN5-219ENST00000637537 SLC35G2Q8TBE7 412 aa20.15■□□□□ 0.82
CLN5-219ENST00000637537 EPS8L1Q8TE68 723 aa20.15■□□□□ 0.82
CLN5-219ENST00000637537 MFAP3P55082 362 aa20.15■□□□□ 0.82
CLN5-219ENST00000637537 IGBP1P78318 339 aa20.15■□□□□ 0.82
CLN5-219ENST00000637537 USP37Q86T82 979 aa20.15■□□□□ 0.82
CLN5-219ENST00000637537 RHPN2Q8IUC4 686 aa20.15■□□□□ 0.82
CLN5-219ENST00000637537 FAM71AQ8IYT1 594 aa20.15■□□□□ 0.82
CLN5-219ENST00000637537 SHCBP1Q8NEM2 672 aa20.15■□□□□ 0.82
CLN5-219ENST00000637537 MORC4Q8TE76 937 aa20.15■□□□□ 0.82
CLN5-219ENST00000637537 HDAC7Q8WUI4 952 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms