RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 N4BP1O75113 896 aaKnown RBP20.39■□□□□ 0.85
CLN6-220ENST00000637450 RFPL2O75678 378 aa20.39■□□□□ 0.85
CLN6-220ENST00000637450 PRKCBP05771 671 aa20.39■□□□□ 0.85
CLN6-220ENST00000637450 MYBP10242 640 aa20.39■□□□□ 0.85
CLN6-220ENST00000637450 FXR2P51116 673 aaKnown RBP eCLIP20.39■□□□□ 0.85
CLN6-220ENST00000637450 TUSC3Q13454 348 aa20.39■□□□□ 0.85
CLN6-220ENST00000637450 TDGQ13569 410 aa20.39■□□□□ 0.85
CLN6-220ENST00000637450 ECM1Q16610 540 aa20.39■□□□□ 0.85
CLN6-220ENST00000637450 HAUS3Q68CZ6 603 aa20.39■□□□□ 0.85
CLN6-220ENST00000637450 LILRA6Q6PI73 481 aa20.39■□□□□ 0.85
CLN6-220ENST00000637450 DEPTORQ8TB45 409 aa20.39■□□□□ 0.85
CLN6-220ENST00000637450 RIN2Q8WYP3 895 aaPredicted RBP20.39■□□□□ 0.85
CLN6-220ENST00000637450 ZNF707Q96C28 371 aaPredicted RBP20.39■□□□□ 0.85
CLN6-220ENST00000637450 SH2B1Q9NRF2 756 aaPredicted RBP20.39■□□□□ 0.85
CLN6-220ENST00000637450 CACNG4Q9UBN1 327 aa20.39■□□□□ 0.85
CLN6-220ENST00000637450 USP20Q9Y2K6 914 aa20.39■□□□□ 0.85
CLN6-220ENST00000637450 PTGESO14684 152 aa20.38■□□□□ 0.85
CLN6-220ENST00000637450 GALR2O43603 387 aaPredicted RBP20.38■□□□□ 0.85
CLN6-220ENST00000637450 CCT6AP40227 531 aaKnown RBP20.38■□□□□ 0.85
CLN6-220ENST00000637450 CREMQ03060 361 aa20.38■□□□□ 0.85
CLN6-220ENST00000637450 GNL2Q13823 731 aaKnown RBP20.38■□□□□ 0.85
CLN6-220ENST00000637450 PDIA5Q14554 519 aa20.38■□□□□ 0.85
CLN6-220ENST00000637450 PPP2R5AQ15172 486 aa20.38■□□□□ 0.85
CLN6-220ENST00000637450 ASTLQ6HA08 431 aaPredicted RBP20.38■□□□□ 0.85
CLN6-220ENST00000637450 TMEM105Q8N8V8 129 aa20.38■□□□□ 0.85
CLN6-220ENST00000637450 FAM184AQ8NB25 1140 aa20.38■□□□□ 0.85
CLN6-220ENST00000637450 KIF2CQ99661 725 aa20.38■□□□□ 0.85
CLN6-220ENST00000637450 NT5C3AQ9H0P0 336 aa20.38■□□□□ 0.85
CLN6-220ENST00000637450 POLD4Q9HCU8 107 aa20.38■□□□□ 0.85
CLN6-220ENST00000637450 IGSF9Q9P2J2 1179 aa20.38■□□□□ 0.85
CLN6-220ENST00000637450 LRWD1Q9UFC0 647 aa20.38■□□□□ 0.85
CLN6-220ENST00000637450 KMT2EQ8IZD2 1858 aa20.38■□□□□ 0.85
CLN6-220ENST00000637450 SF3B1O75533 1304 aaKnown RBP eCLIP20.37■□□□□ 0.858e-9■■■■■ 155.1
CLN6-220ENST00000637450 CASTOR2A6NHX0 329 aa20.37■□□□□ 0.85
CLN6-220ENST00000637450 EDN1P05305 212 aa20.37■□□□□ 0.85
CLN6-220ENST00000637450 THP07101 528 aa20.37■□□□□ 0.85
CLN6-220ENST00000637450 RPL17P18621 184 aaKnown RBP20.37■□□□□ 0.85
CLN6-220ENST00000637450 U2AF2P26368 475 aaKnown RBP eCLIP20.37■□□□□ 0.85
CLN6-220ENST00000637450 NBR1Q14596 966 aa20.37■□□□□ 0.85
CLN6-220ENST00000637450 NAB2Q15742 525 aa20.37■□□□□ 0.85
CLN6-220ENST00000637450 TMEM132AQ24JP5 1023 aa20.37■□□□□ 0.85
CLN6-220ENST00000637450 RTP2Q5QGT7 225 aa20.37■□□□□ 0.85
CLN6-220ENST00000637450 SMG7Q92540 1137 aaKnown RBP20.37■□□□□ 0.85
CLN6-220ENST00000637450 STAMQ92783 540 aa20.37■□□□□ 0.85
CLN6-220ENST00000637450 ATOH1Q92858 354 aaPredicted RBP20.37■□□□□ 0.85
CLN6-220ENST00000637450 ADPGKQ9BRR6 497 aa20.37■□□□□ 0.85
CLN6-220ENST00000637450 CXCL16Q9H2A7 254 aa20.37■□□□□ 0.85
CLN6-220ENST00000637450 BHMT2Q9H2M3 363 aa20.37■□□□□ 0.85
CLN6-220ENST00000637450 ZDHHC7Q9NXF8 308 aa20.37■□□□□ 0.85
CLN6-220ENST00000637450 DAXXQ9UER7 740 aaPredicted RBP20.37■□□□□ 0.85
CLN6-220ENST00000637450 NOL7Q9UMY1 257 aaKnown RBP20.37■□□□□ 0.85
CLN6-220ENST00000637450 KIAA1024Q9UPX6 916 aa20.37■□□□□ 0.85
CLN6-220ENST00000637450 CLUHO75153 1309 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 MYO15AQ9UKN7 3530 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 H0Y858 1186 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 RECQL4O94761 1208 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 LIG1P18858 919 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 CLCN5P51795 746 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 EFNA5P52803 228 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 EEF1DP3Q658K8 133 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 PRSS55Q6UWB4 352 aaPredicted RBP20.36■□□□□ 0.85
CLN6-220ENST00000637450 GLYCTKQ8IVS8 523 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 KIFAP3Q92845 792 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 IFT74Q96LB3 600 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 PRKD2Q9BZL6 878 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 MFSD1Q9H3U5 465 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 FAM86C1Q9NVL1 165 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 EPS15L1Q9UBC2 864 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 DUSP12Q9UNI6 340 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 DMDP11532 3685 aa20.36■□□□□ 0.85
CLN6-220ENST00000637450 KIF4AO95239 1232 aa20.35■□□□□ 0.85
CLN6-220ENST00000637450 GBP2P32456 591 aaPredicted RBP20.35■□□□□ 0.85
CLN6-220ENST00000637450 TOB1P50616 345 aaPredicted RBP20.35■□□□□ 0.85
CLN6-220ENST00000637450 PTGDRQ13258 359 aa20.35■□□□□ 0.85
CLN6-220ENST00000637450 NT5DC1Q5TFE4 455 aa20.35■□□□□ 0.85
CLN6-220ENST00000637450 IGSF22Q8N9C0 903 aa20.35■□□□□ 0.85
CLN6-220ENST00000637450 HASPINQ8TF76 798 aa20.35■□□□□ 0.85
CLN6-220ENST00000637450 MYADMQ96S97 322 aa20.35■□□□□ 0.85
CLN6-220ENST00000637450 CLSTN3Q9BQT9 956 aa20.35■□□□□ 0.85
CLN6-220ENST00000637450 TTPALQ9BTX7 342 aa20.35■□□□□ 0.85
CLN6-220ENST00000637450 KIFC3Q9BVG8 833 aa20.35■□□□□ 0.85
CLN6-220ENST00000637450 STK24Q9Y6E0 443 aa20.35■□□□□ 0.85
CLN6-220ENST00000637450 DENND4AQ7Z401 1863 aa20.35■□□□□ 0.85
CLN6-220ENST00000637450 ZFHX2Q9C0A1 2572 aaPredicted RBP20.35■□□□□ 0.85
CLN6-220ENST00000637450 TDRD15B5MCY1 1934 aaKnown RBP20.34■□□□□ 0.85
CLN6-220ENST00000637450 NPR3P17342 541 aa20.34■□□□□ 0.85
CLN6-220ENST00000637450 DCAF4L1Q3SXM0 396 aa20.34■□□□□ 0.85
CLN6-220ENST00000637450 FAM171A1Q5VUB5 890 aa20.34■□□□□ 0.85
CLN6-220ENST00000637450 LNX1Q8TBB1 728 aaPredicted RBP20.34■□□□□ 0.85
CLN6-220ENST00000637450 RSAD2Q8WXG1 361 aa20.34■□□□□ 0.85
CLN6-220ENST00000637450 PIK3R5Q8WYR1 880 aa20.34■□□□□ 0.85
CLN6-220ENST00000637450 PIDD1Q9HB75 910 aa20.34■□□□□ 0.85
CLN6-220ENST00000637450 DDX19AQ9NUU7 478 aaKnown RBP20.34■□□□□ 0.85
CLN6-220ENST00000637450 GDAQ9Y2T3 454 aa20.34■□□□□ 0.85
CLN6-220ENST00000637450 PCDHB6Q9Y5E3 794 aa20.34■□□□□ 0.85
CLN6-220ENST00000637450 ZMYND10O75800 440 aa20.33■□□□□ 0.85
CLN6-220ENST00000637450 ELAVL2Q12926 359 aaKnown RBP20.33■□□□□ 0.85
CLN6-220ENST00000637450 ATF7IP2Q5U623 682 aa20.33■□□□□ 0.85
CLN6-220ENST00000637450 CEP57Q86XR8 500 aa20.33■□□□□ 0.85
CLN6-220ENST00000637450 FLCNQ8NFG4 579 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms