RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 SEC24CP53992 1094 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 BIRC3Q13489 604 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 LY6KQ17RY6 165 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 ALS2CLQ60I27 953 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 C12orf56Q8IXR9 622 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 ATP8B4Q8TF62 1192 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 GPRASP2Q96D09 838 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 ZNF112Q9UJU3 913 aa20.3■□□□□ 0.84
CLN5-216ENST00000636780 GRIN3BO60391 1043 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 CCDC172P0C7W6 258 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 CTNNA1P35221 906 aaKnown RBP20.29■□□□□ 0.84
CLN5-216ENST00000636780 LIG4P49917 911 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 ZBTB33Q86T24 672 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 ZNF564Q8TBZ8 553 aaPredicted RBP20.29■□□□□ 0.84
CLN5-216ENST00000636780 ATP6V0A1Q93050 837 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 NT5C1BQ96P26 610 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 TMEM8AQ9HCN3 771 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 PDLIM7Q9NR12 457 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 FBXO40Q9UH90 709 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 GRIN2DO15399 1336 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 SPOPO43791 374 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 OPA1O60313 960 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 RTN2O75298 545 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 RPS12P25398 132 aaKnown RBP20.29■□□□□ 0.84
CLN5-216ENST00000636780 MFAP3P55082 362 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 DR1Q01658 176 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 VGLL4Q14135 290 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 EMC2Q15006 297 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 FAM182AQ5T1J6 154 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 GPD1LQ8N335 351 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 PRELID2Q8N945 189 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 DDX1Q92499 740 aaKnown RBP20.29■□□□□ 0.84
CLN5-216ENST00000636780 HERPUD2Q9BSE4 406 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 AS3MTQ9HBK9 375 aa20.29■□□□□ 0.84
CLN5-216ENST00000636780 CSDE1O75534 798 aaKnown RBP20.28■□□□□ 0.84
CLN5-216ENST00000636780 USP2O75604 605 aaPredicted RBP20.28■□□□□ 0.84
CLN5-216ENST00000636780 GJC1P36383 396 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 MYBPC2Q14324 1141 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 NCAPG2Q86XI2 1143 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 OR5B17Q8NGF7 314 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 BCAS4Q8TDM0 211 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 IPO4Q8TEX9 1081 aaKnown RBP20.28■□□□□ 0.84
CLN5-216ENST00000636780 C1orf54Q8WWF1 131 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 CLMNQ96JQ2 1002 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 PPP1R16BQ96T49 567 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 ST6GALNAC4Q9H4F1 302 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 AFG3L2Q9Y4W6 797 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 POLR2AP24928 1970 aaKnown RBP20.28■□□□□ 0.84
CLN5-216ENST00000636780 SHBGP04278 402 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 GLRA2P23416 452 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 TMOD1P28289 359 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 TNFSF9P41273 254 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 PPFIA1Q13136 1202 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 TRIP13Q15645 432 aaPredicted RBP20.28■□□□□ 0.84
CLN5-216ENST00000636780 ZNF394Q53GI3 561 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 TDRD10Q5VZ19 366 aaKnown RBP20.28■□□□□ 0.84
CLN5-216ENST00000636780 ATG4AQ8WYN0 398 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 MFSD14AQ96MC6 490 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 ATP6V0A4Q9HBG4 840 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 DNAJC17Q9NVM6 304 aaKnown RBP20.28■□□□□ 0.84
CLN5-216ENST00000636780 EXOC7Q9UPT5 735 aa20.28■□□□□ 0.84
CLN5-216ENST00000636780 SPATA31C2B4DYI2 1134 aa20.27■□□□□ 0.84
CLN5-216ENST00000636780 GOLGA8KD6RF30 607 aa20.27■□□□□ 0.84
CLN5-216ENST00000636780 ALCAMQ13740 583 aa20.27■□□□□ 0.84
CLN5-216ENST00000636780 CRELD2Q6UXH1 353 aaPredicted RBP20.27■□□□□ 0.84
CLN5-216ENST00000636780 PRUNE1Q86TP1 453 aa20.27■□□□□ 0.84
CLN5-216ENST00000636780 TRAPPC12Q8WVT3 735 aa20.27■□□□□ 0.84
CLN5-216ENST00000636780 KIFAP3Q92845 792 aa20.27■□□□□ 0.84
CLN5-216ENST00000636780 MAGOHBQ96A72 148 aaKnown RBP20.27■□□□□ 0.84
CLN5-216ENST00000636780 CYFIP2Q96F07 1278 aa20.27■□□□□ 0.84
CLN5-216ENST00000636780 APOBEC3GQ9HC16 384 aaKnown RBP20.27■□□□□ 0.84
CLN5-216ENST00000636780 CNOT8Q9UFF9 292 aaKnown RBP20.27■□□□□ 0.84
CLN5-216ENST00000636780 ADAMTS5Q9UNA0 930 aa20.27■□□□□ 0.84
CLN5-216ENST00000636780 VGLL3A8MV65 326 aa20.27■□□□□ 0.83
CLN5-216ENST00000636780 H0YGN5 161 aa20.27■□□□□ 0.83
CLN5-216ENST00000636780 CLDN3O15551 220 aa20.27■□□□□ 0.83
CLN5-216ENST00000636780 DGAT1O75907 488 aa20.27■□□□□ 0.83
CLN5-216ENST00000636780 RRM1P23921 792 aa20.27■□□□□ 0.83
CLN5-216ENST00000636780 PEX5P50542 639 aa20.27■□□□□ 0.83
CLN5-216ENST00000636780 PDE6CP51160 858 aa20.27■□□□□ 0.83
CLN5-216ENST00000636780 OSTNP61366 133 aa20.27■□□□□ 0.83
CLN5-216ENST00000636780 GADL1Q6ZQY3 521 aa20.27■□□□□ 0.83
CLN5-216ENST00000636780 LRRC71Q8N4P6 559 aa20.27■□□□□ 0.83
CLN5-216ENST00000636780 FBXO25Q8TCJ0 367 aa20.27■□□□□ 0.83
CLN5-216ENST00000636780 PCYT2Q99447 389 aa20.27■□□□□ 0.83
CLN5-216ENST00000636780 NTPCRQ9BSD7 190 aaKnown RBP20.27■□□□□ 0.83
CLN5-216ENST00000636780 UTP11Q9Y3A2 253 aaKnown RBP20.27■□□□□ 0.83
CLN5-216ENST00000636780 NFS1Q9Y697 457 aa20.27■□□□□ 0.83
CLN5-216ENST00000636780 MYO1FO00160 1098 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 CES2O00748 559 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 SUPT20HL2P0C7V6 817 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 ANXA13P27216 316 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 HSPA9P38646 679 aaKnown RBP20.26■□□□□ 0.83
CLN5-216ENST00000636780 ZNF844Q08AG5 666 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 SUPT20HL1Q3ZLR7 823 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 WHAMMQ8TF30 809 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 IFT74Q96LB3 600 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 ZSWIM1Q9BR11 485 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 HEMGNQ9BXL5 484 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 ZNF302Q9NR11 478 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms