RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 ITGA8P53708 1063 aa16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 LRCH2Q5VUJ6 765 aa16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 SIAH1Q8IUQ4 282 aa16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 KIAA0825Q8IV33 1275 aa16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 C12orf50Q8NA57 414 aaPredicted RBP16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 DCAF4Q8WV16 495 aa16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 LRRC19Q9H756 370 aa16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 TTC4O95801 387 aa16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 ATP2A2P16615 1042 aaKnown RBP16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 FAM182BQ5T319 152 aa16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 PLEKHO2Q8TD55 490 aa16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 FAM167BQ9BTA0 163 aa16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 PCDHAC2Q9Y5I4 1007 aa16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 SPATA31A6Q5VVP1 1343 aa16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 SIPA1L1O43166 1804 aa16.04■□□□□ 0.16
THUMPD1-206ENST00000636554 THAP12O43422 761 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 RFX1P22670 979 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 PEX19P40855 299 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 RWDD2BP57060 319 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 RNASELQ05823 741 aaKnown RBP16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 TCEAL1Q15170 157 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 TBC1D10BQ4KMP7 808 aaPredicted RBP16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 C1orf220Q5T0J3 134 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 SLC17A8Q8NDX2 589 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 MICAL1Q8TDZ2 1067 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 PSPC1Q8WXF1 523 aaKnown RBP16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 IFT74Q96LB3 600 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 FAM118BQ9BPY3 351 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 CBWD1Q9BRT8 395 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 ETNK1Q9HBU6 452 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 NINJ2Q9NZG7 142 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 WHRNQ9P202 907 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 K7ENM7 598 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 CCNB1P14635 433 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 IVDP26440 423 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 FOXN2P32314 431 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 GCKP35557 465 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 PDE6BP35913 854 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 LACTBP83111 547 aaPredicted RBP16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 FMO1Q01740 532 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 EPC2Q52LR7 807 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 DAW1Q8N136 415 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 SPOCK2Q92563 424 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 TMEM237Q96Q45 408 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 TUFT1Q9NNX1 390 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 BATF3Q9NR55 127 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 NKX1-2Q9UD57 310 aaPredicted RBP16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 STK24Q9Y6E0 443 aa16.03■□□□□ 0.16
THUMPD1-206ENST00000636554 UBE4BO95155 1302 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 HIP1RO75146 1068 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 PSMD10O75832 226 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 SMNDC1O75940 238 aaKnown RBP eCLIP16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 MTA2O94776 668 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 UPP2O95045 317 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 GDF11O95390 407 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 FOSP01100 380 aaPredicted RBP16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 CALCAP01258 141 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 ABL2P42684 1182 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 VAMP7P51809 220 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 TMEM63BQ5T3F8 832 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 DAB2IPQ5VWQ8 1189 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 CNKSR1Q969H4 720 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 KREMEN1Q96MU8 473 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 TRIM7Q9C029 511 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 KLHL14Q9P2G3 628 aa16.02■□□□□ 0.16
THUMPD1-206ENST00000636554 F5H6K3 240 aa16.02■□□□□ 0.15
THUMPD1-206ENST00000636554 UNC5CO95185 931 aa16.02■□□□□ 0.15
THUMPD1-206ENST00000636554 ATP5DP30049 168 aa16.02■□□□□ 0.15
THUMPD1-206ENST00000636554 ATP11AP98196 1134 aa16.02■□□□□ 0.15
THUMPD1-206ENST00000636554 ICA1Q05084 483 aa16.02■□□□□ 0.15
THUMPD1-206ENST00000636554 MTFR1Q15390 333 aa16.02■□□□□ 0.15
THUMPD1-206ENST00000636554 SYDE2Q5VT97 1194 aa16.02■□□□□ 0.15
THUMPD1-206ENST00000636554 PPM1KQ8N3J5 372 aa16.02■□□□□ 0.15
THUMPD1-206ENST00000636554 C7orf43Q8WVR3 580 aa16.02■□□□□ 0.15
THUMPD1-206ENST00000636554 SNF8Q96H20 258 aa16.02■□□□□ 0.15
THUMPD1-206ENST00000636554 MYLK2Q9H1R3 596 aa16.02■□□□□ 0.15
THUMPD1-206ENST00000636554 BTAF1O14981 1849 aa16.02■□□□□ 0.15
THUMPD1-206ENST00000636554 DDTLA6NHG4 134 aaPredicted RBP16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 CLGNO14967 610 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 NDUFB10O96000 172 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 TAC1P20366 129 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 CRY2Q49AN0 593 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 C9orf72Q96LT7 481 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 MAGEB18Q96M61 343 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 PAIP2Q9BPZ3 127 aaKnown RBP16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 SEL1LQ9UBV2 794 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 NAALADL1Q9UQQ1 740 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 ADGRA3Q8IWK6 1321 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 TARSP26639 723 aaKnown RBP16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 RASA3Q14644 834 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 CERKLQ49MI3 558 aaPredicted RBP16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 RBM26Q5T8P6 1007 aaKnown RBP16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 APOBEC3HQ6NTF7 200 aaKnown RBP16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 STXBP4Q6ZWJ1 553 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 PHLDB2Q86SQ0 1253 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 MKL1Q969V6 931 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 ERP27Q96DN0 273 aa16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 ZMYND8Q9ULU4 1186 aaPredicted RBP16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 R3HDM2Q9Y2K5 976 aaKnown RBP16.01■□□□□ 0.15
THUMPD1-206ENST00000636554 TOM1O60784 492 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms