RNA–Protein interactions for RNA: ENST00000636448.1

CACNA1D-209, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 3,978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-209ENST00000636448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 SLC26A7Q8TE54 656 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 KAT5Q92993 513 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 FAM49AQ9H0Q0 323 aaPredicted RBP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 C10orf88Q9H8K7 445 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 CTNNAL1Q9UBT7 734 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 DDX20Q9UHI6 824 aaKnown RBP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 MYH10P35580 1976 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 A6NJR5 290 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 PDXKO00764 312 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 DKC1O60832 514 aaKnown RBP eCLIP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 DNAJC6O75061 913 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 LGR5O75473 907 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 GPC4O75487 556 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 HSPA9P38646 679 aaKnown RBP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 BTKQ06187 659 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 PPATQ06203 517 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 FRMD5Q7Z6J6 570 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 FBXO33Q7Z6M2 555 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 MYLK4Q86YV6 388 aaPredicted RBP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 IRF2BP1Q8IU81 584 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 MTA3Q9BTC8 594 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 HSPBP1Q9NZL4 362 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 TSR3Q9UJK0 312 aaKnown RBP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 TACC3Q9Y6A5 838 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 POLRMTO00411 1230 aaKnown RBP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 FOXP2O15409 715 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 WEE2P0C1S8 567 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 FGFR2P21802 821 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 QARSP47897 775 aaKnown RBP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 RGS7P49802 495 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 KCNMA1Q12791 1236 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 KRT39Q6A163 491 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 LDHDQ86WU2 507 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 CBWD2Q8IUF1 395 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 TBC1D16Q8TBP0 767 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 ZBTB10Q96DT7 871 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 AGAP3Q96P47 875 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 PNMA5Q96PV4 448 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 TMEM237Q96Q45 408 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 STK33Q9BYT3 514 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 DNAI2Q9GZS0 605 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 STK24Q9Y6E0 443 aa8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 MRPL42Q9Y6G3 142 aaKnown RBP8.64□□□□□ -1.03
CACNA1D-209ENST00000636448 LUC7L3O95232 432 aaKnown RBP8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 ANP32DO95626 131 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 EYA4O95677 639 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 SESN2P58004 480 aaPredicted RBP8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 GABPAQ06546 454 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 FAM47CQ5HY64 1035 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 SPOPLQ6IQ16 392 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 FBXL13Q8NEE6 735 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 ACER1Q8TDN7 264 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 AGBL1Q96MI9 1066 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 FAM20AQ96MK3 541 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 MKNK1Q9BUB5 465 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 SLC9A2Q9UBY0 812 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 PALM3A6NDB9 673 aaPredicted RBP8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 NEMP1O14524 444 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 PRPSAP2O60256 369 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 SHBGP04278 402 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 APRTP07741 180 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 ZCCHC18P0CG32 403 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 PAX7P23759 505 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 PSMC1P62191 440 aaKnown RBP8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 CYP4A22Q5TCH4 519 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 CCT6BQ92526 530 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 KRT35Q92764 455 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 SLC5A5Q92911 643 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 SNF8Q96H20 258 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 SLC4A9Q96Q91 983 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 BLOC1S4Q9NUP1 217 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 DLGAP2Q9P1A6 1054 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 CLTCQ00610 1675 aaKnown RBP8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 SPECC1L-ADORA2AF8WAN1 911 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 CASQ2O14958 399 aaPredicted RBP8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 LPXNO60711 386 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 NOL3O60936 208 aaKnown RBP8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 TJP3O95049 919 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 GCLCP48506 637 aaPredicted RBP8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 LMNB2Q03252 620 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 EML3Q32P44 896 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 CDC42EP5Q6NZY7 148 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 C4orf50Q6ZRC1 276 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 TRMT10CQ7L0Y3 403 aaKnown RBP8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 MCF2L2Q86YR7 1114 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 RNF135Q8IUD6 432 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 CCNYL1Q8N7R7 359 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 DEPDC1BQ8WUY9 529 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 MPHOSPH6Q99547 160 aaKnown RBP8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 FGFBP2Q9BYJ0 223 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 TAS2R14Q9NYV8 317 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 SALL4Q9UJQ4 1053 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 PRR12Q9ULL5 1215 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 FAF1Q9UNN5 650 aaPredicted RBP8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 ARL2BPQ9Y2Y0 163 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 JCADQ9P266 1359 aa8.63□□□□□ -1.03
CACNA1D-209ENST00000636448 ZNF263O14978 683 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms