RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 LMAN1LQ9HAT1 526 aa20.3■□□□□ 0.84
CLN6-212ENST00000636020 HES2Q9Y543 173 aa20.3■□□□□ 0.84
CLN6-212ENST00000636020 SRGAP2CP0DJJ0 459 aa20.29■□□□□ 0.84
CLN6-212ENST00000636020 CNR2P34972 360 aa20.29■□□□□ 0.84
CLN6-212ENST00000636020 CXCL12P48061 93 aa20.29■□□□□ 0.84
CLN6-212ENST00000636020 SATB1Q01826 763 aa20.29■□□□□ 0.84
CLN6-212ENST00000636020 SRSF5Q13243 272 aaKnown RBP20.29■□□□□ 0.84
CLN6-212ENST00000636020 PABPC1LQ4VXU2 614 aaKnown RBP20.29■□□□□ 0.84
CLN6-212ENST00000636020 TANGO2Q6ICL3 276 aa20.29■□□□□ 0.84
CLN6-212ENST00000636020 POTEHQ6S545 545 aa20.29■□□□□ 0.84
CLN6-212ENST00000636020 ANO5Q75V66 913 aa20.29■□□□□ 0.84
CLN6-212ENST00000636020 GSTCDQ8NEC7 633 aa20.29■□□□□ 0.84
CLN6-212ENST00000636020 PRPF31Q8WWY3 499 aaKnown RBP20.29■□□□□ 0.84
CLN6-212ENST00000636020 ING5Q8WYH8 240 aa20.29■□□□□ 0.84
CLN6-212ENST00000636020 RABGGTAQ92696 567 aa20.29■□□□□ 0.84
CLN6-212ENST00000636020 ZMIZ1Q9ULJ6 1067 aa20.29■□□□□ 0.84
CLN6-212ENST00000636020 CHURC1-FNTBB4DL54 471 aa20.28■□□□□ 0.84
CLN6-212ENST00000636020 TADA2AO75478 443 aa20.28■□□□□ 0.84
CLN6-212ENST00000636020 PSMD10O75832 226 aa20.28■□□□□ 0.84
CLN6-212ENST00000636020 FNTBP49356 437 aa20.28■□□□□ 0.84
CLN6-212ENST00000636020 PFKFB3Q16875 520 aaPredicted RBP20.28■□□□□ 0.84
CLN6-212ENST00000636020 B3GNT9Q6UX72 402 aa20.28■□□□□ 0.84
CLN6-212ENST00000636020 LNX1Q8TBB1 728 aaPredicted RBP20.28■□□□□ 0.84
CLN6-212ENST00000636020 PIK3R5Q8WYR1 880 aa20.28■□□□□ 0.84
CLN6-212ENST00000636020 ELSPBP1Q96BH3 223 aa20.28■□□□□ 0.84
CLN6-212ENST00000636020 MCRS1Q96EZ8 462 aa20.28■□□□□ 0.84
CLN6-212ENST00000636020 C6orf50Q9HD87 102 aa20.28■□□□□ 0.84
CLN6-212ENST00000636020 GDE1Q9NZC3 331 aa20.28■□□□□ 0.84
CLN6-212ENST00000636020 GIT1Q9Y2X7 761 aa20.28■□□□□ 0.84
CLN6-212ENST00000636020 SDK1Q7Z5N4 2213 aa20.28■□□□□ 0.84
CLN6-212ENST00000636020 C1QTNF9BB2RNN3 333 aa20.27■□□□□ 0.84
CLN6-212ENST00000636020 ADAM12O43184 909 aa20.27■□□□□ 0.84
CLN6-212ENST00000636020 C1QTNF9P0C862 333 aa20.27■□□□□ 0.84
CLN6-212ENST00000636020 UVSSAQ2YD98 709 aa20.27■□□□□ 0.84
CLN6-212ENST00000636020 AASDHQ4L235 1098 aaPredicted RBP20.27■□□□□ 0.84
CLN6-212ENST00000636020 AXDND1Q5T1B0 1012 aaPredicted RBP20.27■□□□□ 0.84
CLN6-212ENST00000636020 SLC7A14Q8TBB6 771 aa20.27■□□□□ 0.84
CLN6-212ENST00000636020 CCDC136Q96JN2 1154 aa20.27■□□□□ 0.84
CLN6-212ENST00000636020 TTPALQ9BTX7 342 aa20.27■□□□□ 0.84
CLN6-212ENST00000636020 BRPF3Q9ULD4 1205 aa20.27■□□□□ 0.84
CLN6-212ENST00000636020 MRPS23Q9Y3D9 190 aaKnown RBP20.27■□□□□ 0.84
CLN6-212ENST00000636020 SF3B1O75533 1304 aaKnown RBP eCLIP20.27■□□□□ 0.83
CLN6-212ENST00000636020 IGF2RP11717 2491 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 SLC27A2O14975 620 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 ZBTB43O43298 467 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 LAMTOR4Q0VGL1 99 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 GAS6Q14393 721 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 PSMD5Q16401 504 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 PLA2G4FQ68DD2 849 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 UNQ6494/PRO21346Q6UXR6 183 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 FAM160A2Q8N612 972 aaPredicted RBP20.26■□□□□ 0.83
CLN6-212ENST00000636020 KDF1Q8NAX2 398 aaPredicted RBP20.26■□□□□ 0.83
CLN6-212ENST00000636020 PSPC1Q8WXF1 523 aaKnown RBP20.26■□□□□ 0.83
CLN6-212ENST00000636020 FAM3CQ92520 227 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 TMEM143Q96AN5 459 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 CCDC51Q96ER9 411 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 APOL6Q9BWW8 343 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 CSRNP2Q9H175 543 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 BRD9Q9H8M2 597 aa20.26■□□□□ 0.83
CLN6-212ENST00000636020 TSPAN1O60635 241 aa20.25■□□□□ 0.83
CLN6-212ENST00000636020 CDC27P30260 824 aa20.25■□□□□ 0.83
CLN6-212ENST00000636020 AXLP30530 894 aa20.25■□□□□ 0.83
CLN6-212ENST00000636020 NPEPPSP55786 919 aa20.25■□□□□ 0.83
CLN6-212ENST00000636020 AAMPQ13685 434 aa20.25■□□□□ 0.83
CLN6-212ENST00000636020 SF3A2Q15428 464 aaKnown RBP20.25■□□□□ 0.83
CLN6-212ENST00000636020 LONP2Q86WA8 852 aa20.25■□□□□ 0.83
CLN6-212ENST00000636020 ZNF579Q8NAF0 562 aaKnown RBP20.25■□□□□ 0.83
CLN6-212ENST00000636020 SLC7A3Q8WY07 619 aa20.25■□□□□ 0.83
CLN6-212ENST00000636020 PAAF1Q9BRP4 392 aa20.25■□□□□ 0.83
CLN6-212ENST00000636020 RXFP3Q9NSD7 469 aa20.25■□□□□ 0.83
CLN6-212ENST00000636020 CACNG4Q9UBN1 327 aa20.25■□□□□ 0.83
CLN6-212ENST00000636020 GREB1Q4ZG55 1949 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 ERLIN2O94905 339 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 KCNK5O95279 499 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 CHRNB1P11230 501 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 FCARP24071 287 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 USP11P51784 963 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 GRIK3Q13003 919 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 RAB33AQ14088 237 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 GRM2Q14416 872 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 HSP90AA2PQ14568 343 aaPredicted RBP20.24■□□□□ 0.83
CLN6-212ENST00000636020 SLC5A9Q2M3M2 681 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 FAM171A1Q5VUB5 890 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 NOTUMQ6P988 496 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 RTL10Q7L3V2 364 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 CEP57Q86XR8 500 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 SPEM1Q8N4L4 309 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 RNF149Q8NC42 400 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 CCDC12Q8WUD4 166 aaPredicted RBP20.24■□□□□ 0.83
CLN6-212ENST00000636020 CPB2Q96IY4 423 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 NXF3Q9H4D5 531 aaKnown RBP20.24■□□□□ 0.83
CLN6-212ENST00000636020 DHX33Q9H6R0 707 aaKnown RBP20.24■□□□□ 0.83
CLN6-212ENST00000636020 TRPV5Q9NQA5 729 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 AVENQ9NQS1 362 aaPredicted RBP20.24■□□□□ 0.83
CLN6-212ENST00000636020 WDFY3Q8IZQ1 3526 aa20.24■□□□□ 0.83
CLN6-212ENST00000636020 GOLGA8AA7E2F4 631 aa20.23■□□□□ 0.83
CLN6-212ENST00000636020 GOLGA8BA8MQT2 603 aa20.23■□□□□ 0.83
CLN6-212ENST00000636020 K7ESF4 209 aa20.23■□□□□ 0.83
CLN6-212ENST00000636020 PAPSS2O95340 614 aaPredicted RBP20.23■□□□□ 0.83
CLN6-212ENST00000636020 RHOP08100 348 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms