RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 RIN2Q8WYP3 895 aaPredicted RBP13.93□□□□□ -0.18
PTPN11-206ENST00000635652 BSNDQ8WZ55 320 aa13.93□□□□□ -0.18
PTPN11-206ENST00000635652 IFT74Q96LB3 600 aa13.93□□□□□ -0.18
PTPN11-206ENST00000635652 ADPGKQ9BRR6 497 aa13.93□□□□□ -0.18
PTPN11-206ENST00000635652 BHMT2Q9H2M3 363 aa13.93□□□□□ -0.18
PTPN11-206ENST00000635652 PDZD7Q9H5P4 517 aa13.93□□□□□ -0.18
PTPN11-206ENST00000635652 CHST7Q9NS84 486 aa13.93□□□□□ -0.18
PTPN11-206ENST00000635652 CACNG4Q9UBN1 327 aa13.93□□□□□ -0.18
PTPN11-206ENST00000635652 WDR87Q6ZQQ6 2873 aa13.93□□□□□ -0.18
PTPN11-206ENST00000635652 CFAP54Q96N23 3096 aa13.92□□□□□ -0.18
PTPN11-206ENST00000635652 CASTOR2A6NHX0 329 aa13.92□□□□□ -0.18
PTPN11-206ENST00000635652 ACKR2O00590 384 aa13.92□□□□□ -0.18
PTPN11-206ENST00000635652 RFPL2O75678 378 aa13.92□□□□□ -0.18
PTPN11-206ENST00000635652 MUTP22033 750 aa13.92□□□□□ -0.18
PTPN11-206ENST00000635652 NAMPTP43490 491 aa13.92□□□□□ -0.18
PTPN11-206ENST00000635652 FXR2P51116 673 aaKnown RBP eCLIP13.92□□□□□ -0.183e-9■□□□□ 11.2
PTPN11-206ENST00000635652 HSP90AA2PQ14568 343 aaPredicted RBP13.92□□□□□ -0.18
PTPN11-206ENST00000635652 CMASQ8NFW8 434 aaPredicted RBP13.92□□□□□ -0.18
PTPN11-206ENST00000635652 PAAF1Q9BRP4 392 aa13.92□□□□□ -0.18
PTPN11-206ENST00000635652 MFSD1Q9H3U5 465 aa13.92□□□□□ -0.18
PTPN11-206ENST00000635652 PIDD1Q9HB75 910 aa13.92□□□□□ -0.18
PTPN11-206ENST00000635652 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTPN11-206ENST00000635652 KIAA1024Q9UPX6 916 aa13.92□□□□□ -0.18
PTPN11-206ENST00000635652 TRIP11Q15643 1979 aa13.92□□□□□ -0.18
PTPN11-206ENST00000635652 ZMYM2Q9UBW7 1377 aa13.92□□□□□ -0.18
PTPN11-206ENST00000635652 TGM5O43548 720 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 RECQL4O94761 1208 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 THP07101 528 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 RPL17P18621 184 aaKnown RBP13.91□□□□□ -0.18
PTPN11-206ENST00000635652 KCNA4P22459 653 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 GBP2P32456 591 aaPredicted RBP13.91□□□□□ -0.18
PTPN11-206ENST00000635652 EFNA5P52803 228 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 TCF15Q12870 199 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 PTGDRQ13258 359 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 TUSC3Q13454 348 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 TDGQ13569 410 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 PDIA5Q14554 519 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 ECM1Q16610 540 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 CEP57Q86XR8 500 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 C4orf32Q8N8J7 132 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 SNX29Q8TEQ0 813 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 HASPINQ8TF76 798 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 SMG7Q92540 1137 aaKnown RBP13.91□□□□□ -0.18
PTPN11-206ENST00000635652 STAMQ92783 540 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 KIFAP3Q92845 792 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 PHOX2BQ99453 314 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 KIFC3Q9BVG8 833 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 RAB34Q9BZG1 259 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 CCDC113Q9H0I3 377 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 PLEKHA4Q9H4M7 779 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 KCNK12Q9HB15 430 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 DDX19AQ9NUU7 478 aaKnown RBP13.91□□□□□ -0.18
PTPN11-206ENST00000635652 FNIP2Q9P278 1114 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 GDAQ9Y2T3 454 aa13.91□□□□□ -0.18
PTPN11-206ENST00000635652 SF3B1O75533 1304 aaKnown RBP eCLIP13.9□□□□□ -0.181e-6■■■■■ 50.3
PTPN11-206ENST00000635652 DOCK6Q96HP0 2047 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 PTGESO14684 152 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 U2AF2P26368 475 aaKnown RBP eCLIP13.9□□□□□ -0.18
PTPN11-206ENST00000635652 CREMQ03060 361 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 RTP2Q5QGT7 225 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 FAM171A1Q5VUB5 890 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 EEF1DP3Q658K8 133 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 PRSS55Q6UWB4 352 aaPredicted RBP13.9□□□□□ -0.18
PTPN11-206ENST00000635652 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 HDAC7Q8WUI4 952 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 ATOH1Q92858 354 aaPredicted RBP13.9□□□□□ -0.18
PTPN11-206ENST00000635652 KIF2CQ99661 725 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 IRF2BPLQ9H1B7 796 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 WDR6Q9NNW5 1121 aaKnown RBP13.9□□□□□ -0.18
PTPN11-206ENST00000635652 FAM86C1Q9NVL1 165 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 DNM3Q9UQ16 869 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 PCDHB6Q9Y5E3 794 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 STK24Q9Y6E0 443 aa13.9□□□□□ -0.18
PTPN11-206ENST00000635652 PTPRZ1P23471 2315 aaPredicted RBP13.9□□□□□ -0.18
PTPN11-206ENST00000635652 DOCK8Q8NF50 2099 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 CCDC169A6NNP5 214 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 K7ERI5 159 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 KIF4AO95239 1232 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 EDN1P05305 212 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 TOB1P50616 345 aaPredicted RBP13.89□□□□□ -0.19
PTPN11-206ENST00000635652 DCAF4L1Q3SXM0 396 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 ATF7IP2Q5U623 682 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 KRT79Q5XKE5 535 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 MCTP1Q6DN14 999 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 APBB1IPQ7Z5R6 666 aaPredicted RBP13.89□□□□□ -0.19
PTPN11-206ENST00000635652 GPR65Q8IYL9 337 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 IGSF22Q8N9C0 903 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 FLCNQ8NFG4 579 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 TTPALQ9BTX7 342 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 NT5C3AQ9H0P0 336 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 CXCL16Q9H2A7 254 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 IGSF9Q9P2J2 1179 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 FBXL21Q9UKT6 434 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 CLUHO75153 1309 aa13.89□□□□□ -0.19
PTPN11-206ENST00000635652 RIF1Q5UIP0 2472 aaKnown RBP13.88□□□□□ -0.19
PTPN11-206ENST00000635652 PP2D1A8MPX8 630 aa13.88□□□□□ -0.19
PTPN11-206ENST00000635652 E9PMD0 336 aa13.88□□□□□ -0.19
PTPN11-206ENST00000635652 H0Y858 1186 aa13.88□□□□□ -0.19
PTPN11-206ENST00000635652 N4BP1O75113 896 aaKnown RBP13.88□□□□□ -0.19
PTPN11-206ENST00000635652 C1RP00736 705 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms