RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CEP135Q66GS9 1140 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 C12orf56Q8IXR9 622 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 RPUSD2Q8IZ73 545 aaKnown RBP15.73■□□□□ 0.11
LINC00339-208ENST00000634934 XXYLT1Q8NBI6 393 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 ZSWIM2Q8NEG5 633 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 FAM213AQ9BRX8 229 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 FTHL17Q9BXU8 183 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 UBE2OQ9C0C9 1292 aaKnown RBP15.73■□□□□ 0.11
LINC00339-208ENST00000634934 NFE2L3Q9Y4A8 694 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 SMTNL1A8MU46 457 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 OGTO15294 1046 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 FGFR1OPO95684 399 aaKnown RBP15.73■□□□□ 0.11
LINC00339-208ENST00000634934 ACRP10323 421 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 ACOT2P49753 483 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 PPIGQ13427 754 aaKnown RBP eCLIP15.73■□□□□ 0.11
LINC00339-208ENST00000634934 NFIL3Q16649 462 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 TCTN1Q2MV58 587 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 CNKSR3Q6P9H4 555 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 FOXR2Q6PJQ5 311 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 LUZP1Q86V48 1076 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 SLC9A9Q8IVB4 645 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 DHX40Q8IX18 779 aaKnown RBP15.73■□□□□ 0.11
LINC00339-208ENST00000634934 CEP120Q8N960 986 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 RDH13Q8NBN7 331 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 VWCEQ96DN2 955 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 DMAC2Q9NW81 257 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 FRMD4BQ9Y2L6 1034 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 PCDHB2Q9Y5E7 798 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 IKBKBO14920 756 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 KIAA0391O15091 583 aaKnown RBP15.72■□□□□ 0.11
LINC00339-208ENST00000634934 EXTL3O43909 919 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 LDHAP00338 332 aaKnown RBP15.72■□□□□ 0.11
LINC00339-208ENST00000634934 CASP4P49662 377 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 MYBPC2Q14324 1141 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 HSP90AA4PQ58FG1 418 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 ZBTB41Q5SVQ8 909 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 C9orf50Q5SZB4 431 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 LRRC55Q6ZSA7 311 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 C16orf59Q7L2K0 433 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 RTN4RL1Q86UN2 441 aaPredicted RBP15.72■□□□□ 0.11
LINC00339-208ENST00000634934 CREBRFQ8IUR6 639 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 GPD1LQ8N335 351 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 CEP63Q96MT8 703 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 APOL6Q9BWW8 343 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 IL23AQ9NPF7 189 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 FAM105AQ9NUU6 356 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 FANCLQ9NW38 375 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 HES2Q9Y543 173 aa15.72■□□□□ 0.11
LINC00339-208ENST00000634934 GOLGA6L19H0YKK7 550 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 ENPP3O14638 875 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 CTIFO43310 598 aaKnown RBP15.71■□□□□ 0.11
LINC00339-208ENST00000634934 AKAP3O75969 853 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 PFKMP08237 780 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 STAG3L1P0CL83 205 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 IKBKEQ14164 716 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 NCAPHQ15003 741 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 CBWD2Q8IUF1 395 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 ZC3H3Q8IXZ2 948 aaKnown RBP15.71■□□□□ 0.11
LINC00339-208ENST00000634934 RNF169Q8NCN4 708 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 LINC01599Q8WXQ3 324 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 CCDC94Q9BW85 323 aaPredicted RBP15.71■□□□□ 0.11
LINC00339-208ENST00000634934 TSPYL2Q9H2G4 693 aaPredicted RBP15.71■□□□□ 0.11
LINC00339-208ENST00000634934 NXF3Q9H4D5 531 aaKnown RBP15.71■□□□□ 0.11
LINC00339-208ENST00000634934 KIAA1586Q9HCI6 787 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 RGS18Q9NS28 235 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 SAMSN1Q9NSI8 373 aaKnown RBP15.71■□□□□ 0.11
LINC00339-208ENST00000634934 SNTG2Q9NY99 539 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 IPPQ9Y573 584 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 SZT2Q5T011 3432 aa15.71■□□□□ 0.11
LINC00339-208ENST00000634934 ZNF233A6NK53 670 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 FAM189A1O60320 539 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 EPB41P11171 864 aaKnown RBP15.7■□□□□ 0.1
LINC00339-208ENST00000634934 PSMC2P35998 433 aaKnown RBP15.7■□□□□ 0.1
LINC00339-208ENST00000634934 TNFSF9P41273 254 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 RAB27AP51159 221 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 SNRNP35Q16560 246 aaKnown RBP15.7■□□□□ 0.1
LINC00339-208ENST00000634934 KYAT1Q16773 422 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 CCDC40Q4G0X9 1142 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 SLC24A5Q71RS6 500 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 FILIP1Q7Z7B0 1213 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 TMEM192Q8IY95 271 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 FAM186BQ8IYM0 893 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 SMG8Q8ND04 991 aaKnown RBP15.7■□□□□ 0.1
LINC00339-208ENST00000634934 TET1Q8NFU7 2136 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 TMEM174Q8WUU8 243 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 FAM212AQ96EL1 285 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 THAP9Q9H5L6 903 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 C1orf112Q9NSG2 853 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 TRIOBPQ9H2D6 2365 aa15.7■□□□□ 0.1
LINC00339-208ENST00000634934 A0A0U1RQF3 1178 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 C9IYK1 514 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 SLC16A3O15427 465 aaKnown RBP15.69■□□□□ 0.1
LINC00339-208ENST00000634934 CLTAP09496 248 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 SKIP12755 728 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 ACTN1P12814 892 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 PRKCSHP14314 528 aaPredicted RBP15.69■□□□□ 0.1
LINC00339-208ENST00000634934 AKAP5P24588 427 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 BMP8BP34820 402 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 GRM5P41594 1212 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 KCNJ6P48051 423 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms