RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 DUSP6Q16828 381 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 PTCRAQ6ISU1 281 aaPredicted RBP17.21■□□□□ 0.35
LINC00339-207ENST00000634712 MPZL3Q6UWV2 235 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 DYMQ7RTS9 669 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 TAS1R3Q7RTX0 852 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 FAM178BQ8IXR5 827 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 PDILTQ8N807 584 aa17.21■□□□□ 0.35
LINC00339-207ENST00000634712 MRPL43Q8N983 215 aaKnown RBP17.21■□□□□ 0.35
LINC00339-207ENST00000634712 UHRF1Q96T88 793 aaPredicted RBP17.21■□□□□ 0.35
LINC00339-207ENST00000634712 HIDE1A8MVS5 230 aa17.2■□□□□ 0.34
LINC00339-207ENST00000634712 MCF2P10911 925 aa17.2■□□□□ 0.34
LINC00339-207ENST00000634712 HARSP12081 509 aaKnown RBP17.2■□□□□ 0.34
LINC00339-207ENST00000634712 ME1P48163 572 aa17.2■□□□□ 0.34
LINC00339-207ENST00000634712 ZNF131P52739 623 aa17.2■□□□□ 0.34
LINC00339-207ENST00000634712 OSTNP61366 133 aa17.2■□□□□ 0.34
LINC00339-207ENST00000634712 DSC1Q08554 894 aa17.2■□□□□ 0.34
LINC00339-207ENST00000634712 CLUL1Q15846 466 aa17.2■□□□□ 0.34
LINC00339-207ENST00000634712 GSTCDQ8NEC7 633 aa17.2■□□□□ 0.34
LINC00339-207ENST00000634712 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.2■□□□□ 0.34
LINC00339-207ENST00000634712 BCL7CQ8WUZ0 217 aaPredicted RBP17.2■□□□□ 0.34
LINC00339-207ENST00000634712 ZBP1Q9H171 429 aa17.2■□□□□ 0.34
LINC00339-207ENST00000634712 CDT1Q9H211 546 aa17.2■□□□□ 0.34
LINC00339-207ENST00000634712 PTPRHQ9HD43 1115 aa17.2■□□□□ 0.34
LINC00339-207ENST00000634712 TOPORSQ9NS56 1045 aaPredicted RBP17.2■□□□□ 0.34
LINC00339-207ENST00000634712 ANKFY1Q9P2R3 1169 aa17.2■□□□□ 0.34
LINC00339-207ENST00000634712 ATG2AQ2TAZ0 1938 aa17.2■□□□□ 0.34
LINC00339-207ENST00000634712 TCF20Q9UGU0 1960 aaKnown RBP17.19■□□□□ 0.34
LINC00339-207ENST00000634712 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.19■□□□□ 0.34
LINC00339-207ENST00000634712 C2orf71A6NGG8 1288 aa17.19■□□□□ 0.34
LINC00339-207ENST00000634712 CLDN3O15551 220 aa17.19■□□□□ 0.34
LINC00339-207ENST00000634712 TOM1L1O75674 476 aa17.19■□□□□ 0.34
LINC00339-207ENST00000634712 CTSAP10619 480 aa17.19■□□□□ 0.34
LINC00339-207ENST00000634712 LTBRP36941 435 aa17.19■□□□□ 0.34
LINC00339-207ENST00000634712 GRM5P41594 1212 aa17.19■□□□□ 0.34
LINC00339-207ENST00000634712 DNM1Q05193 864 aaKnown RBP17.19■□□□□ 0.34
LINC00339-207ENST00000634712 TUSC3Q13454 348 aa17.19■□□□□ 0.34
LINC00339-207ENST00000634712 ZPBP2Q6X784 338 aa17.19■□□□□ 0.34
LINC00339-207ENST00000634712 DDX12PQ92771 950 aa17.19■□□□□ 0.34
LINC00339-207ENST00000634712 ACAP3Q96P50 834 aa17.19■□□□□ 0.34
LINC00339-207ENST00000634712 CD207Q9UJ71 328 aa17.19■□□□□ 0.34
LINC00339-207ENST00000634712 SSX2IPQ9Y2D8 614 aa17.19■□□□□ 0.34
LINC00339-207ENST00000634712 TDRD15B5MCY1 1934 aaKnown RBP17.19■□□□□ 0.34
LINC00339-207ENST00000634712 MYH15Q9Y2K3 1946 aa17.19■□□□□ 0.34
LINC00339-207ENST00000634712 TADA2AO75478 443 aa17.18■□□□□ 0.34
LINC00339-207ENST00000634712 LIG4P49917 911 aa17.18■□□□□ 0.34
LINC00339-207ENST00000634712 DLX2Q07687 328 aaPredicted RBP17.18■□□□□ 0.34
LINC00339-207ENST00000634712 NOLC1Q14978 699 aaKnown RBP eCLIP17.18■□□□□ 0.34
LINC00339-207ENST00000634712 LLGL2Q6P1M3 1020 aa17.18■□□□□ 0.34
LINC00339-207ENST00000634712 AUTS2Q8WXX7 1259 aa17.18■□□□□ 0.34
LINC00339-207ENST00000634712 ZBTB45Q96K62 511 aaPredicted RBP17.18■□□□□ 0.34
LINC00339-207ENST00000634712 EMILIN2Q9BXX0 1053 aa17.18■□□□□ 0.34
LINC00339-207ENST00000634712 LRRC27Q9C0I9 530 aa17.18■□□□□ 0.34
LINC00339-207ENST00000634712 MRPL17Q9NRX2 175 aaKnown RBP17.18■□□□□ 0.34
LINC00339-207ENST00000634712 FAM13BQ9NYF5 915 aa17.18■□□□□ 0.34
LINC00339-207ENST00000634712 TBX20Q9UMR3 447 aa17.18■□□□□ 0.34
LINC00339-207ENST00000634712 ATP6V1DQ9Y5K8 247 aa17.18■□□□□ 0.34
LINC00339-207ENST00000634712 VCANP13611 3396 aa17.18■□□□□ 0.34
LINC00339-207ENST00000634712 GRXCR2A6NFK2 248 aa17.17■□□□□ 0.34
LINC00339-207ENST00000634712 MYMKA6NI61 221 aa17.17■□□□□ 0.34
LINC00339-207ENST00000634712 HNRNPDLO14979 420 aaKnown RBP17.17■□□□□ 0.34
LINC00339-207ENST00000634712 TBX10O75333 385 aa17.17■□□□□ 0.34
LINC00339-207ENST00000634712 BRD1O95696 1058 aa17.17■□□□□ 0.34
LINC00339-207ENST00000634712 SOD2P04179 222 aa17.17■□□□□ 0.34
LINC00339-207ENST00000634712 IDEP14735 1019 aa17.17■□□□□ 0.34
LINC00339-207ENST00000634712 GAP43P17677 238 aa17.17■□□□□ 0.34
LINC00339-207ENST00000634712 PROZP22891 400 aa17.17■□□□□ 0.34
LINC00339-207ENST00000634712 NMT1P30419 496 aaKnown RBP17.17■□□□□ 0.34
LINC00339-207ENST00000634712 KIAA1841Q6NSI8 718 aa17.17■□□□□ 0.34
LINC00339-207ENST00000634712 CEP120Q8N960 986 aa17.17■□□□□ 0.34
LINC00339-207ENST00000634712 IQUBQ8NA54 791 aa17.17■□□□□ 0.34
LINC00339-207ENST00000634712 MARCH5Q9NX47 278 aa17.17■□□□□ 0.34
LINC00339-207ENST00000634712 BARX2Q9UMQ3 279 aaPredicted RBP17.17■□□□□ 0.34
LINC00339-207ENST00000634712 IRAK3Q9Y616 596 aa17.17■□□□□ 0.34
LINC00339-207ENST00000634712 A0A087X0B3 334 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 CASTOR2A6NHX0 329 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 PTGESO14684 152 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 URODP06132 367 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 AMPD3Q01432 767 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 HSP90AA2PQ14568 343 aaPredicted RBP17.16■□□□□ 0.34
LINC00339-207ENST00000634712 RABGGTAQ92696 567 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 CASP10Q92851 521 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 DHX58Q96C10 678 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 VN1R3Q9BXE9 311 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 CUEDC2Q9H467 287 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 MRPL44Q9H9J2 332 aaKnown RBP17.16■□□□□ 0.34
LINC00339-207ENST00000634712 CLEC1BQ9P126 229 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 SEL1LQ9UBV2 794 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 RCOR1Q9UKL0 485 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 ADAM28Q9UKQ2 775 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 PCDHA7Q9UN72 937 aa17.16■□□□□ 0.34
LINC00339-207ENST00000634712 TNFRSF10AO00220 468 aa17.15■□□□□ 0.34
LINC00339-207ENST00000634712 C2CD2LO14523 706 aa17.15■□□□□ 0.34
LINC00339-207ENST00000634712 CLASP2O75122 1294 aaKnown RBP17.15■□□□□ 0.34
LINC00339-207ENST00000634712 GLP2RO95838 553 aa17.15■□□□□ 0.34
LINC00339-207ENST00000634712 IL9P15248 144 aa17.15■□□□□ 0.34
LINC00339-207ENST00000634712 KLRC2P26717 231 aa17.15■□□□□ 0.34
LINC00339-207ENST00000634712 KRT85P78386 507 aa17.15■□□□□ 0.34
LINC00339-207ENST00000634712 GTF2BQ00403 316 aa17.15■□□□□ 0.34
LINC00339-207ENST00000634712 MCL1Q07820 350 aa17.15■□□□□ 0.34
LINC00339-207ENST00000634712 SMAD4Q13485 552 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms