RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 PCSK1P29120 753 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 ALDH1A3P47895 512 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 FLT3LGP49771 235 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 PER3P56645 1201 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 RAP2BP61225 183 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 MGAT2Q10469 447 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 VPS72Q15906 364 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 ANO4Q32M45 955 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 LSM12Q3MHD2 195 aaKnown RBP3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 AFMIDQ63HM1 303 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 GPRIN1Q7Z2K8 1008 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 ZNF572Q7Z3I7 529 aaPredicted RBP3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 FAM83AQ86UY5 434 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 ZFPM1Q8IX07 1006 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 ZGPATQ8N5A5 531 aaKnown RBP3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 OR10H5Q8NGA6 315 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 CPT1CQ8TCG5 803 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 NRG4Q8WWG1 115 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 FUBP3Q96I24 572 aaKnown RBP eCLIP3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 FAXDC2Q96IV6 333 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 PAWRQ96IZ0 340 aaKnown RBP3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 ASPSCR1Q9BZE9 553 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 SENP6Q9GZR1 1112 aaPredicted RBP3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 TMPRSS5Q9H3S3 457 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 ZNF768Q9H5H4 540 aaKnown RBP3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 BCO1Q9HAY6 547 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 LANCL2Q9NS86 450 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 PARPBPQ9NWS1 579 aa3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 AURKAIP1Q9NWT8 199 aaPredicted RBP3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 EIF2B4Q9UI10 523 aaKnown RBP3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 ING1Q9UK53 422 aaPredicted RBP3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 AJAP1Q9UKB5 411 aaPredicted RBP3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 REXO2Q9Y3B8 237 aaKnown RBP3.28□□□□□ -1.88
SCARNA4-201ENST00000629045 TNKSO95271 1327 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 SHTN1A0MZ66 631 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 ALG1L2C9J202 215 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 NARSO43776 548 aaKnown RBP3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 GPR32O75388 356 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 SCAF4O95104 1147 aaKnown RBP3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 RAP2AP10114 183 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 RBP3P10745 1247 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 HSP90B1P14625 803 aaKnown RBP3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 GSPT1P15170 499 aaKnown RBP3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 NR4A1P22736 598 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 ZFP36P26651 326 aaKnown RBP3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 GUCY1A2P33402 732 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 RNASE9P60153 205 aaKnown RBP3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 FAM189BP81408 668 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 KLF10Q13118 480 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 TUBA3CQ13748 450 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 ODF1Q14990 250 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 PTPN21Q16825 1174 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 BRDTQ58F21 947 aaPredicted RBP3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 RABL3Q5HYI8 236 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 NAIF1Q69YI7 327 aaPredicted RBP3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 TUBA3EQ6PEY2 450 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 PDZD4Q76G19 769 aaPredicted RBP3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 RHOT1Q8IXI2 618 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 RPUSD2Q8IZ73 545 aaKnown RBP3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 ZNF276Q8N554 614 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 SLC16A11Q8NCK7 471 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 CCHCR1Q8TD31 782 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 TFAP2CQ92754 450 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 PHACTR3Q96KR7 559 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 TEKT5Q96M29 485 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 NEU1Q99519 415 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 MYOCQ99972 504 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 TEX101Q9BY14 249 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 ZNF703Q9H7S9 590 aaPredicted RBP3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 MMRN2Q9H8L6 949 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 GPRC5BQ9NZH0 403 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 SERPINB13Q9UIV8 391 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 INTUQ9ULD6 942 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 ACTL7AQ9Y615 435 aa3.27□□□□□ -1.89
SCARNA4-201ENST00000629045 PNPLA7Q6ZV29 1317 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 WASHC2CQ9Y4E1 1318 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 TBKBP1A7MCY6 615 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 AHRRA9YTQ3 701 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 AKAP8O43823 692 aaKnown RBP3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 FZD7O75084 574 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 ENDOD1O94919 500 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 SLPIP03973 132 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 AMY1AP04745 511 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 CHN2P52757 468 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 KIF23Q02241 960 aaPredicted RBP3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 NHLH2Q02577 135 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 BMT2Q1RMZ1 405 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 C3orf36Q3SXR2 165 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 EFCAB12Q6NXP0 572 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 PNMA8AQ86V59 439 aaPredicted RBP3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 ZCRB1Q8TBF4 217 aaKnown RBP3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 ZNF483Q8TF39 744 aaPredicted RBP3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 SLC25A43Q8WUT9 341 aaPredicted RBP3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 CLIP3Q96DZ5 547 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 NDC1Q9BTX1 674 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 MRI1Q9BV20 369 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 NRDE2Q9H7Z3 1164 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 HOMER2Q9NSB8 354 aa3.26□□□□□ -1.89
SCARNA4-201ENST00000629045 TRPM5Q9NZQ8 1165 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms