RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 GPR62Q9BZJ7 368 aa13.34□□□□□ -0.27
UBR1-212ENST00000627960 CXCL16Q9H2A7 254 aa13.34□□□□□ -0.27
UBR1-212ENST00000627960 SFXN1Q9H9B4 322 aa13.34□□□□□ -0.27
UBR1-212ENST00000627960 TSHZ2Q9NRE2 1034 aa13.34□□□□□ -0.27
UBR1-212ENST00000627960 ADAM28Q9UKQ2 775 aa13.34□□□□□ -0.27
UBR1-212ENST00000627960 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.34□□□□□ -0.27
UBR1-212ENST00000627960 TMEM221A6NGB7 291 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 CCDC169A6NNP5 214 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 C2CD4DB7Z1M9 353 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 M0R296 226 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 PTGESO14684 152 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 TEX28O15482 410 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 HIP1RO75146 1068 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 TADA2AO75478 443 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 RECQL4O94761 1208 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 THP07101 528 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 NPTX2P47972 431 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 PEX3P56589 373 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 HSP90AA2PQ14568 343 aaPredicted RBP13.33□□□□□ -0.28
UBR1-212ENST00000627960 USP41Q3LFD5 358 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 HYIQ5T013 277 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 ATF7IP2Q5U623 682 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 ARL6IP4Q66PJ3 421 aaKnown RBP13.33□□□□□ -0.28
UBR1-212ENST00000627960 TMC5Q6UXY8 1006 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 DAW1Q8N136 415 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 KCTD17Q8N5Z5 321 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 FEZF2Q8TBJ5 459 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 MFSD14AQ96MC6 490 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 RUSC1Q9BVN2 902 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 TMEM134Q9H6X4 195 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 TNFSF13BQ9Y275 285 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 MUC6Q6W4X9 2439 aa13.33□□□□□ -0.28
UBR1-212ENST00000627960 VWA3AA6NCI4 1184 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 CASTOR2A6NHX0 329 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 SPDYE4A6NLX3 237 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 C1RP00736 705 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 SIGLEC14Q08ET2 396 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 MAPK7Q13164 816 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 ZRSR1Q15695 479 aaKnown RBP13.32□□□□□ -0.28
UBR1-212ENST00000627960 NAB2Q15742 525 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 APBB1IPQ7Z5R6 666 aaPredicted RBP13.32□□□□□ -0.28
UBR1-212ENST00000627960 ZDHHC14Q8IZN3 488 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 CMASQ8NFW8 434 aaPredicted RBP13.32□□□□□ -0.28
UBR1-212ENST00000627960 RIN2Q8WYP3 895 aaPredicted RBP13.32□□□□□ -0.28
UBR1-212ENST00000627960 PBXIP1Q96AQ6 731 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 B3GALT6Q96L58 329 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 DRC1Q96MC2 740 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 PAAF1Q9BRP4 392 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 TIPINQ9BVW5 301 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 NT5C3AQ9H0P0 336 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 C17orf75Q9HAS0 396 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 MAN1C1Q9NR34 630 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.32□□□□□ -0.28
UBR1-212ENST00000627960 FNIP2Q9P278 1114 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 ARHGAP28Q9P2N2 729 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 CACNG4Q9UBN1 327 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 DPP7Q9UHL4 492 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 USTQ9Y2C2 406 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 GDAQ9Y2T3 454 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 RBM19Q9Y4C8 960 aaKnown RBP13.32□□□□□ -0.28
UBR1-212ENST00000627960 PHLPP2Q6ZVD8 1323 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 CITO14578 2027 aa13.32□□□□□ -0.28
UBR1-212ENST00000627960 VWA8A3KMH1 1905 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 SFI1A8K8P3 1242 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 GLUD1P00367 558 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 GUCY2CP25092 1073 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 DMP1Q13316 513 aaPredicted RBP13.31□□□□□ -0.28
UBR1-212ENST00000627960 ELMSAN1Q6PJG2 1045 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 C15orf39Q6ZRI6 1047 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 TAS1R3Q7RTX0 852 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 ZBTB33Q86T24 672 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 PLCD3Q8N3E9 789 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 SYT2Q8N9I0 419 aaPredicted RBP13.31□□□□□ -0.28
UBR1-212ENST00000627960 TDRD5Q8NAT2 981 aaKnown RBP13.31□□□□□ -0.28
UBR1-212ENST00000627960 HDAC7Q8WUI4 952 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 PLIN2Q99541 437 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 ACO2Q99798 780 aaKnown RBP13.31□□□□□ -0.28
UBR1-212ENST00000627960 NTPCRQ9BSD7 190 aaKnown RBP13.31□□□□□ -0.28
UBR1-212ENST00000627960 KCNH6Q9H252 994 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 PTPRHQ9HD43 1115 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 KMT5AQ9NQR1 393 aa13.31□□□□□ -0.28
UBR1-212ENST00000627960 SF3B1O75533 1304 aaKnown RBP eCLIP13.31□□□□□ -0.28
UBR1-212ENST00000627960 CCDC195A0A1B0GUA6 201 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 SLC16A4O15374 487 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 SLC26A4O43511 780 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 KIF4AO95239 1232 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 PLA2G4BP0C869 781 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 SPATA31D3P0C874 917 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 GRM5P41594 1212 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 CREMQ03060 361 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 CUL4AQ13619 759 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 RTP2Q5QGT7 225 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 LILRA6Q6PI73 481 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 CYP26C1Q6V0L0 522 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 SPATA31D4Q6ZUB0 917 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 PALB2Q86YC2 1186 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 KREMEN2Q8NCW0 462 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 HASPINQ8TF76 798 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 ASIC4Q96FT7 647 aa13.3□□□□□ -0.28
UBR1-212ENST00000627960 CDK5RAP3Q96JB5 506 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms