RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ADAM15Q13444 863 aa18.34■□□□□ 0.53
UBE3D-208ENST00000626828 COL19A1Q14993 1142 aa18.34■□□□□ 0.53
UBE3D-208ENST00000626828 E2F4Q16254 413 aa18.34■□□□□ 0.53
UBE3D-208ENST00000626828 RESP18Q5W5W9 173 aa18.34■□□□□ 0.53
UBE3D-208ENST00000626828 ZNF720Q7Z2F6 126 aa18.34■□□□□ 0.53
UBE3D-208ENST00000626828 ZBTB33Q86T24 672 aa18.34■□□□□ 0.53
UBE3D-208ENST00000626828 LEO1Q8WVC0 666 aaPredicted RBP18.34■□□□□ 0.53
UBE3D-208ENST00000626828 BICD1Q96G01 975 aa18.34■□□□□ 0.53
UBE3D-208ENST00000626828 ZBTB45Q96K62 511 aaPredicted RBP18.34■□□□□ 0.53
UBE3D-208ENST00000626828 ACAP3Q96P50 834 aa18.34■□□□□ 0.53
UBE3D-208ENST00000626828 FIZ1Q96SL8 496 aa18.34■□□□□ 0.53
UBE3D-208ENST00000626828 TCF25Q9BQ70 676 aa18.34■□□□□ 0.53
UBE3D-208ENST00000626828 SCAND2PQ9GZW5 306 aaPredicted RBP18.34■□□□□ 0.53
UBE3D-208ENST00000626828 TNMDQ9H2S6 317 aa18.34■□□□□ 0.53
UBE3D-208ENST00000626828 ENTPD7Q9NQZ7 604 aa18.34■□□□□ 0.53
UBE3D-208ENST00000626828 KBTBD4Q9NVX7 518 aa18.34■□□□□ 0.53
UBE3D-208ENST00000626828 ABLIM1O14639 778 aa18.33■□□□□ 0.52
UBE3D-208ENST00000626828 POLR2DO15514 142 aaKnown RBP18.33■□□□□ 0.52
UBE3D-208ENST00000626828 B4GALT3O60512 393 aa18.33■□□□□ 0.52
UBE3D-208ENST00000626828 CXCL14O95715 111 aa18.33■□□□□ 0.52
UBE3D-208ENST00000626828 IDEP14735 1019 aa18.33■□□□□ 0.52
UBE3D-208ENST00000626828 NMT1P30419 496 aaKnown RBP18.33■□□□□ 0.52
UBE3D-208ENST00000626828 CTC1Q2NKJ3 1217 aa18.33■□□□□ 0.52
UBE3D-208ENST00000626828 HERC4Q5GLZ8 1057 aaPredicted RBP18.33■□□□□ 0.52
UBE3D-208ENST00000626828 TJAP1Q5JTD0 557 aa18.33■□□□□ 0.52
UBE3D-208ENST00000626828 ADALQ6DHV7 355 aa18.33■□□□□ 0.52
UBE3D-208ENST00000626828 EP400NLQ6ZTU2 488 aa18.33■□□□□ 0.52
UBE3D-208ENST00000626828 RBM23Q86U06 439 aaKnown RBP18.33■□□□□ 0.52
UBE3D-208ENST00000626828 VPS52Q8N1B4 723 aa18.33■□□□□ 0.52
UBE3D-208ENST00000626828 MRPL43Q8N983 215 aaKnown RBP18.33■□□□□ 0.52
UBE3D-208ENST00000626828 DHX58Q96C10 678 aa18.33■□□□□ 0.52
UBE3D-208ENST00000626828 CDCA3Q99618 268 aaPredicted RBP18.33■□□□□ 0.52
UBE3D-208ENST00000626828 TOPORSQ9NS56 1045 aaPredicted RBP18.33■□□□□ 0.52
UBE3D-208ENST00000626828 A0A0C4DFX4 3053 aa18.33■□□□□ 0.52
UBE3D-208ENST00000626828 FSD2A1L4K1 749 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 PIGRP01833 764 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 CMA1P23946 247 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 MATR3P43243 847 aaKnown RBP eCLIP18.32■□□□□ 0.52
UBE3D-208ENST00000626828 NRIP1P48552 1158 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 LIG4P49917 911 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 TFF2Q03403 129 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 MCL1Q07820 350 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 TUSC3Q13454 348 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 SMC1AQ14683 1233 aaKnown RBP18.32■□□□□ 0.52
UBE3D-208ENST00000626828 PLPP4Q5VZY2 271 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 ADGRD2Q7Z7M1 963 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 TMEM173Q86WV6 379 aaPredicted RBP18.32■□□□□ 0.52
UBE3D-208ENST00000626828 SFR1Q86XK3 245 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 CCDC65Q8IXS2 484 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 EFHBQ8N7U6 833 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 MRPL44Q9H9J2 332 aaKnown RBP18.32■□□□□ 0.52
UBE3D-208ENST00000626828 MAGEF1Q9HAY2 307 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 PANK4Q9NVE7 773 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 CLDND1Q9NY35 253 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 KCNH3Q9ULD8 1083 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 EYSQ5T1H1 3165 aa18.32■□□□□ 0.52
UBE3D-208ENST00000626828 PTGESO14684 152 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 CTSAP10619 480 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 KCNA5P22460 613 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 OSTNP61366 133 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 NOLC1Q14978 699 aaKnown RBP eCLIP18.31■□□□□ 0.52
UBE3D-208ENST00000626828 KYAT1Q16773 422 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 LEXMQ3ZCV2 418 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 ZC2HC1CQ53FD0 456 aaPredicted RBP18.31■□□□□ 0.52
UBE3D-208ENST00000626828 XKR4Q5GH76 650 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 ALKAL1Q6UXT8 129 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 CEP120Q8N960 986 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 BCL7CQ8WUZ0 217 aaPredicted RBP18.31■□□□□ 0.52
UBE3D-208ENST00000626828 STAMQ92783 540 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 HVCN1Q96D96 273 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 ANKFY1Q9P2R3 1169 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 PRG3Q9Y2Y8 225 aaPredicted RBP18.31■□□□□ 0.52
UBE3D-208ENST00000626828 PCDHB13Q9Y5F0 798 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 PCDHGC5Q9Y5F6 944 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 IRAK3Q9Y616 596 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 ATG2AQ2TAZ0 1938 aa18.31■□□□□ 0.52
UBE3D-208ENST00000626828 CITO14578 2027 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 SMIM28A0A1B0GU29 152 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 FRMD3A2A2Y4 597 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 HNRNPDLO14979 420 aaKnown RBP18.3■□□□□ 0.52
UBE3D-208ENST00000626828 PER2O15055 1255 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 HARSP12081 509 aaKnown RBP18.3■□□□□ 0.52
UBE3D-208ENST00000626828 BMP1P13497 986 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 GTF2F1P35269 517 aaKnown RBP eCLIP18.3■□□□□ 0.52
UBE3D-208ENST00000626828 DUSP6Q16828 381 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 PUS10Q3MIT2 529 aaKnown RBP18.3■□□□□ 0.52
UBE3D-208ENST00000626828 SLFN12LQ6IEE8 588 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 CNNM4Q6P4Q7 775 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 MAP4K3Q8IVH8 894 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 TMEM87AQ8NBN3 555 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 C7orf25Q9BPX7 421 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 ZBP1Q9H171 429 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 OLFML3Q9NRN5 406 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 SSX2IPQ9Y2D8 614 aa18.3■□□□□ 0.52
UBE3D-208ENST00000626828 REV3LO60673 3130 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 C2orf71A6NGG8 1288 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 HIDE1A8MVS5 230 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 TADA2AO75478 443 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 CLTAP09496 248 aa18.29■□□□□ 0.52
UBE3D-208ENST00000626828 LTBRP36941 435 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms