RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 ZNF467Q7Z7K2 595 aaPredicted RBP21.25■□□□□ 0.99
TREX1-205ENST00000625293 FAM71AQ8IYT1 594 aa21.25■□□□□ 0.99
TREX1-205ENST00000625293 CD99L2Q8TCZ2 262 aa21.25■□□□□ 0.99
TREX1-205ENST00000625293 PRPF31Q8WWY3 499 aaKnown RBP21.25■□□□□ 0.99
TREX1-205ENST00000625293 ADGRA2Q96PE1 1338 aa21.25■□□□□ 0.99
TREX1-205ENST00000625293 TARS2Q9BW92 718 aaKnown RBP21.25■□□□□ 0.99
TREX1-205ENST00000625293 CCDC113Q9H0I3 377 aa21.25■□□□□ 0.99
TREX1-205ENST00000625293 RAB20Q9NX57 234 aa21.25■□□□□ 0.99
TREX1-205ENST00000625293 AGO2Q9UKV8 859 aaKnown RBP21.25■□□□□ 0.99
TREX1-205ENST00000625293 A0A0B4J269 797 aa21.24■□□□□ 0.99
TREX1-205ENST00000625293 ZRANB2O95218 330 aaKnown RBP eCLIP21.24■□□□□ 0.99
TREX1-205ENST00000625293 NAP1L1P55209 391 aaKnown RBP21.24■□□□□ 0.99
TREX1-205ENST00000625293 ARHGAP1Q07960 439 aa21.24■□□□□ 0.99
TREX1-205ENST00000625293 MAMDC4Q6UXC1 1216 aa21.24■□□□□ 0.99
TREX1-205ENST00000625293 EXOC8Q8IYI6 725 aa21.24■□□□□ 0.99
TREX1-205ENST00000625293 LRRC57Q8N9N7 239 aa21.24■□□□□ 0.99
TREX1-205ENST00000625293 SHC3Q92529 594 aa21.24■□□□□ 0.99
TREX1-205ENST00000625293 ZNF516Q92618 1163 aa21.24■□□□□ 0.99
TREX1-205ENST00000625293 ZBTB45Q96K62 511 aaPredicted RBP21.24■□□□□ 0.99
TREX1-205ENST00000625293 ARHGAP39Q9C0H5 1083 aa21.24■□□□□ 0.99
TREX1-205ENST00000625293 KATNBL1Q9H079 304 aa21.24■□□□□ 0.99
TREX1-205ENST00000625293 SMARCAD1Q9H4L7 1026 aa21.24■□□□□ 0.99
TREX1-205ENST00000625293 ZCCHC17Q9NP64 241 aaKnown RBP21.24■□□□□ 0.99
TREX1-205ENST00000625293 VTA1Q9NP79 307 aa21.24■□□□□ 0.99
TREX1-205ENST00000625293 NCANO14594 1321 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 MCM3APO60318 1980 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 STRNO43815 780 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 WNT7BP56706 349 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 SP3Q02447 781 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 ITIH3Q06033 890 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 TCP11Q8WWU5 503 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 PNKPQ96T60 521 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 AGPAT1Q99943 283 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 PLXNB2O15031 1838 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 DLATP10515 647 aaKnown RBP21.23■□□□□ 0.99
TREX1-205ENST00000625293 CTGFP29279 349 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 GALCP54803 685 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 ZPBP2Q6X784 338 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 FAM53CQ9NYF3 392 aa21.23■□□□□ 0.99
TREX1-205ENST00000625293 CCDC151A5D8V7 595 aa21.22■□□□□ 0.99
TREX1-205ENST00000625293 MSCO60682 206 aa21.22■□□□□ 0.99
TREX1-205ENST00000625293 ZC3H11AO75152 810 aaKnown RBP eCLIP21.22■□□□□ 0.99
TREX1-205ENST00000625293 FTCDO95954 541 aa21.22■□□□□ 0.99
TREX1-205ENST00000625293 LDHAP00338 332 aaKnown RBP21.22■□□□□ 0.99
TREX1-205ENST00000625293 TMEM253P0C7T8 217 aa21.22■□□□□ 0.99
TREX1-205ENST00000625293 TNFAIP3P21580 790 aa21.22■□□□□ 0.99
TREX1-205ENST00000625293 EFNA5P52803 228 aa21.22■□□□□ 0.99
TREX1-205ENST00000625293 MFAP3P55082 362 aa21.22■□□□□ 0.99
TREX1-205ENST00000625293 LAMTOR4Q0VGL1 99 aa21.22■□□□□ 0.99
TREX1-205ENST00000625293 PRPF4BQ13523 1007 aaKnown RBP21.22■□□□□ 0.99
TREX1-205ENST00000625293 BRD3Q15059 726 aa21.22■□□□□ 0.99
TREX1-205ENST00000625293 IFI16Q16666 785 aaKnown RBP21.22■□□□□ 0.99
TREX1-205ENST00000625293 PALB2Q86YC2 1186 aa21.22■□□□□ 0.99
TREX1-205ENST00000625293 TPCN2Q8NHX9 752 aa21.22■□□□□ 0.99
TREX1-205ENST00000625293 SLC20A1Q8WUM9 679 aa21.22■□□□□ 0.99
TREX1-205ENST00000625293 NT5C1BQ96P26 610 aa21.22■□□□□ 0.99
TREX1-205ENST00000625293 PARK7Q99497 189 aaKnown RBP21.22■□□□□ 0.99
TREX1-205ENST00000625293 HBP1O60381 514 aa21.21■□□□□ 0.99
TREX1-205ENST00000625293 C4BPAP04003 597 aaKnown RBP21.21■□□□□ 0.99
TREX1-205ENST00000625293 ACOT2P49753 483 aa21.21■□□□□ 0.99
TREX1-205ENST00000625293 LAMC2Q13753 1193 aa21.21■□□□□ 0.99
TREX1-205ENST00000625293 MXD4Q14582 209 aaPredicted RBP21.21■□□□□ 0.99
TREX1-205ENST00000625293 ZACNQ401N2 412 aa21.21■□□□□ 0.99
TREX1-205ENST00000625293 CC2D1AQ6P1N0 951 aaPredicted RBP21.21■□□□□ 0.99
TREX1-205ENST00000625293 TMCO3Q6UWJ1 677 aa21.21■□□□□ 0.99
TREX1-205ENST00000625293 SLFN11Q7Z7L1 901 aa21.21■□□□□ 0.99
TREX1-205ENST00000625293 PPM1KQ8N3J5 372 aa21.21■□□□□ 0.99
TREX1-205ENST00000625293 EMID1Q96A84 441 aaPredicted RBP21.21■□□□□ 0.99
TREX1-205ENST00000625293 NOCTQ9UK39 431 aaKnown RBP21.21■□□□□ 0.99
TREX1-205ENST00000625293 GRB14Q14449 540 aa21.2■□□□□ 0.99
TREX1-205ENST00000625293 ZBTB41Q5SVQ8 909 aa21.2■□□□□ 0.99
TREX1-205ENST00000625293 LRRC71Q8N4P6 559 aa21.2■□□□□ 0.99
TREX1-205ENST00000625293 CAGE1Q8TC20 777 aa21.2■□□□□ 0.99
TREX1-205ENST00000625293 EPS8L1Q8TE68 723 aa21.2■□□□□ 0.99
TREX1-205ENST00000625293 JPH2Q9BR39 696 aaPredicted RBP21.2■□□□□ 0.99
TREX1-205ENST00000625293 MSTO1Q9BUK6 570 aa21.2■□□□□ 0.99
TREX1-205ENST00000625293 TAS2R14Q9NYV8 317 aa21.2■□□□□ 0.99
TREX1-205ENST00000625293 ZSWIM8A7E2V4 1837 aa21.2■□□□□ 0.98
TREX1-205ENST00000625293 MYH10P35580 1976 aa21.2■□□□□ 0.98
TREX1-205ENST00000625293 PTPRJQ12913 1337 aa21.2■□□□□ 0.98
TREX1-205ENST00000625293 CNTNAP2Q9UHC6 1331 aa21.2■□□□□ 0.98
TREX1-205ENST00000625293 TTLL13PA6NNM8 815 aa21.2■□□□□ 0.98
TREX1-205ENST00000625293 FAM189A1O60320 539 aa21.2■□□□□ 0.98
TREX1-205ENST00000625293 RHOXF2BP0C7M4 288 aa21.2■□□□□ 0.98
TREX1-205ENST00000625293 CHRNB2P17787 502 aa21.2■□□□□ 0.98
TREX1-205ENST00000625293 GCNT1Q02742 428 aa21.2■□□□□ 0.98
TREX1-205ENST00000625293 GPR142Q7Z601 462 aa21.2■□□□□ 0.98
TREX1-205ENST00000625293 HNRNPLLQ8WVV9 542 aaKnown RBP21.2■□□□□ 0.98
TREX1-205ENST00000625293 FAM84AQ96KN4 292 aa21.2■□□□□ 0.98
TREX1-205ENST00000625293 RHOXF2Q9BQY4 288 aa21.2■□□□□ 0.98
TREX1-205ENST00000625293 SUGCTQ9HAC7 445 aa21.2■□□□□ 0.98
TREX1-205ENST00000625293 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.2■□□□□ 0.98
TREX1-205ENST00000625293 RBAKQ9NYW8 714 aaPredicted RBP21.2■□□□□ 0.98
TREX1-205ENST00000625293 PLXNA1Q9UIW2 1896 aa21.19■□□□□ 0.98
TREX1-205ENST00000625293 ABLIM1O14639 778 aa21.19■□□□□ 0.98
TREX1-205ENST00000625293 SGPL1O95470 568 aa21.19■□□□□ 0.98
TREX1-205ENST00000625293 SNAI1O95863 264 aaPredicted RBP21.19■□□□□ 0.98
TREX1-205ENST00000625293 GH1P01241 217 aa21.19■□□□□ 0.98
TREX1-205ENST00000625293 TUBBP07437 444 aa21.19■□□□□ 0.98
TREX1-205ENST00000625293 CXCR5P32302 372 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms