RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 ZMYND10O75800 440 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 LARGE1O95461 756 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 SRFP11831 508 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 PCBP1Q15365 356 aaKnown RBP eCLIP12.27□□□□□ -0.45
DDX41-218ENST00000625286 USP41Q3LFD5 358 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 CPLX2Q6PUV4 134 aaKnown RBP12.27□□□□□ -0.45
DDX41-218ENST00000625286 PARM1Q6UWI2 310 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 SLFN12Q8IYM2 578 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 MAML2Q8IZL2 1156 aaPredicted RBP12.27□□□□□ -0.45
DDX41-218ENST00000625286 NECAB1Q8N987 351 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 LNX1Q8TBB1 728 aaPredicted RBP12.27□□□□□ -0.45
DDX41-218ENST00000625286 HASPINQ8TF76 798 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 FGF14Q92915 247 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 MTMR9Q96QG7 549 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 NFKBIZQ9BYH8 718 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 POLR3FQ9H1D9 316 aaPredicted RBP12.27□□□□□ -0.45
DDX41-218ENST00000625286 PLEKHA4Q9H4M7 779 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 ANKEF1Q9NU02 776 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 PCDHA12Q9UN75 941 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 NUMBLQ9Y6R0 609 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 MYH15Q9Y2K3 1946 aa12.27□□□□□ -0.45
DDX41-218ENST00000625286 BTBD18B2RXH4 712 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 STK25O00506 426 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 MARCH6O60337 910 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 DGAT1O75907 488 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 C1RP00736 705 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 GPC5P78333 572 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 TFDP1Q14186 410 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 SPECC1Q5M775 1068 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 SLC27A1Q6PCB7 646 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 CD300LGQ6UXG3 332 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 GET4Q7L5D6 327 aaPredicted RBP12.26□□□□□ -0.45
DDX41-218ENST00000625286 MAEAQ7L5Y9 396 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 GRASPQ7Z6J2 395 aaPredicted RBP12.26□□□□□ -0.45
DDX41-218ENST00000625286 GPR65Q8IYL9 337 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 BSNDQ8WZ55 320 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 STAMQ92783 540 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 FOXQ1Q9C009 403 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 TMEM60Q9H2L4 133 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 FZD8Q9H461 694 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 TTC12Q9H892 705 aaPredicted RBP12.26□□□□□ -0.45
DDX41-218ENST00000625286 ZDHHC7Q9NXF8 308 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.26□□□□□ -0.45
DDX41-218ENST00000625286 ORC3Q9UBD5 711 aaPredicted RBP12.26□□□□□ -0.45
DDX41-218ENST00000625286 PARP2Q9UGN5 583 aa12.26□□□□□ -0.45
DDX41-218ENST00000625286 MTF2Q9Y483 593 aaPredicted RBP12.26□□□□□ -0.45
DDX41-218ENST00000625286 NCOR2Q9Y618 2525 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 CASTOR2A6NHX0 329 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 TADA2AO75478 443 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 KIF4AO95239 1232 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 BAG4O95429 457 aaKnown RBP12.25□□□□□ -0.45
DDX41-218ENST00000625286 TXKP42681 527 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 ID4P47928 161 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 FOXK2Q01167 660 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 GRIK3Q13003 919 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 HSP90AA2PQ14568 343 aaPredicted RBP12.25□□□□□ -0.45
DDX41-218ENST00000625286 PHLDB3Q6NSJ2 640 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 RSPO2Q6UXX9 243 aaPredicted RBP12.25□□□□□ -0.45
DDX41-218ENST00000625286 ITFG1Q8TB96 612 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 NXPE3Q969Y0 559 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 NAP1L4Q99733 375 aaKnown RBP12.25□□□□□ -0.45
DDX41-218ENST00000625286 TRIM6Q9C030 488 aaPredicted RBP12.25□□□□□ -0.45
DDX41-218ENST00000625286 PDZD7Q9H5P4 517 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 PIDD1Q9HB75 910 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 POLD4Q9HCU8 107 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 SLC2A4RGQ9NR83 387 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.25□□□□□ -0.45
DDX41-218ENST00000625286 FBXW11Q9UKB1 542 aa12.25□□□□□ -0.45
DDX41-218ENST00000625286 USO1O60763 962 aaKnown RBP12.24□□□□□ -0.45
DDX41-218ENST00000625286 MED24O75448 989 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 CDKL5O76039 1030 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 SP9P0CG40 484 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 FSHRP23945 695 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 KRT2P35908 639 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 STARD6P59095 220 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 NCBP1Q09161 790 aaKnown RBP12.24□□□□□ -0.45
DDX41-218ENST00000625286 ST3GAL1Q11201 340 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 CALCRLQ16602 461 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 ME3Q16798 604 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 FAM171A1Q5VUB5 890 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 EEF1DP3Q658K8 133 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 CDCA2Q69YH5 1023 aaPredicted RBP12.24□□□□□ -0.45
DDX41-218ENST00000625286 DCLRE1AQ6PJP8 1040 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 PPP4R3CPQ6ZMV5 832 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 CATSPER3Q86XQ3 398 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 DCLK2Q8N568 766 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 PIK3R5Q8WYR1 880 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 RMDN1Q96DB5 314 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 ARHGEF3Q9NR81 526 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 HCFC1R1Q9NWW0 138 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 SNTG2Q9NY99 539 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 DPP7Q9UHL4 492 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 SIT1Q9Y3P8 196 aa12.24□□□□□ -0.45
DDX41-218ENST00000625286 LRRIQ4A6NIV6 560 aa12.23□□□□□ -0.45
DDX41-218ENST00000625286 SHISA7A6NL88 538 aa12.23□□□□□ -0.45
DDX41-218ENST00000625286 NRG2O14511 850 aaPredicted RBP12.23□□□□□ -0.45
DDX41-218ENST00000625286 CCL16O15467 120 aa12.23□□□□□ -0.45
DDX41-218ENST00000625286 JAK2O60674 1132 aa12.23□□□□□ -0.45
DDX41-218ENST00000625286 NR1I2O75469 434 aa12.23□□□□□ -0.45
DDX41-218ENST00000625286 LMNAP02545 664 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms