RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 PHYKPLQ8IUZ5 450 aa3.6□□□□□ -1.83
CHD2-203ENST00000625243 FAM177A1Q8N128 213 aaPredicted RBP3.6□□□□□ -1.83
CHD2-203ENST00000625243 C7orf31Q8N865 590 aa3.6□□□□□ -1.83
CHD2-203ENST00000625243 KIAA1958Q8N8K9 716 aa3.6□□□□□ -1.83
CHD2-203ENST00000625243 APPBP2Q92624 585 aa3.6□□□□□ -1.83
CHD2-203ENST00000625243 DPF1Q92782 380 aa3.6□□□□□ -1.83
CHD2-203ENST00000625243 NEU1Q99519 415 aa3.6□□□□□ -1.83
CHD2-203ENST00000625243 HEPHQ9BQS7 1158 aa3.6□□□□□ -1.83
CHD2-203ENST00000625243 AIFM2Q9BRQ8 373 aa3.6□□□□□ -1.83
CHD2-203ENST00000625243 TMX1Q9H3N1 280 aa3.6□□□□□ -1.83
CHD2-203ENST00000625243 TBCCD1Q9NVR7 557 aa3.6□□□□□ -1.83
CHD2-203ENST00000625243 ATP11BQ9Y2G3 1177 aa3.6□□□□□ -1.83
CHD2-203ENST00000625243 NOX1Q9Y5S8 564 aa3.6□□□□□ -1.83
CHD2-203ENST00000625243 MANSC4A6NHS7 340 aaPredicted RBP3.59□□□□□ -1.83
CHD2-203ENST00000625243 B5MCH6 92 aa3.59□□□□□ -1.83
CHD2-203ENST00000625243 PPP1R12AO14974 1030 aaPredicted RBP3.59□□□□□ -1.83
CHD2-203ENST00000625243 PCDH8O95206 1070 aa3.59□□□□□ -1.83
CHD2-203ENST00000625243 MECP2P51608 486 aaKnown RBP3.59□□□□□ -1.83
CHD2-203ENST00000625243 ZNF174Q15697 407 aa3.59□□□□□ -1.83
CHD2-203ENST00000625243 RUSC1-AS1Q66K80 236 aa3.59□□□□□ -1.83
CHD2-203ENST00000625243 TMEM132CQ8N3T6 1108 aa3.59□□□□□ -1.83
CHD2-203ENST00000625243 SYNPOQ8N3V7 929 aa3.59□□□□□ -1.83
CHD2-203ENST00000625243 LILRB2Q8N423 598 aa3.59□□□□□ -1.83
CHD2-203ENST00000625243 MSL3Q8N5Y2 521 aaKnown RBP3.59□□□□□ -1.83
CHD2-203ENST00000625243 ZSWIM2Q8NEG5 633 aa3.59□□□□□ -1.83
CHD2-203ENST00000625243 FERMT2Q96AC1 680 aa3.59□□□□□ -1.83
CHD2-203ENST00000625243 POFUT1Q9H488 388 aa3.59□□□□□ -1.83
CHD2-203ENST00000625243 ZMYM3Q14202 1370 aa3.59□□□□□ -1.83
CHD2-203ENST00000625243 H7C1D1 291 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 M0R2C6 588 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 CHN2P52757 468 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 BMT2Q1RMZ1 405 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 TRIM61Q5EBN2 209 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 AGAP9Q5VTM2 703 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 C11orf87Q6NUJ2 197 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 FGD2Q7Z6J4 655 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 MAPKAPK5Q8IW41 473 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 OR56A1Q8NGH5 318 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 SH3TC2Q8TF17 1288 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 PHACTR3Q96KR7 559 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 RNPC3Q96LT9 517 aaKnown RBP3.58□□□□□ -1.84
CHD2-203ENST00000625243 UROC1Q96N76 676 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 WACQ9BTA9 647 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.58□□□□□ -1.84
CHD2-203ENST00000625243 TBX22Q9Y458 520 aa3.58□□□□□ -1.84
CHD2-203ENST00000625243 MRPL42Q9Y6G3 142 aaKnown RBP3.58□□□□□ -1.84
CHD2-203ENST00000625243 ZNF804BA4D1E1 1349 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 TP73O15350 636 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 CDC45O75419 566 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 ELANEP08246 267 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 TCEA2Q15560 299 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 C2orf27AQ580R0 203 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 MTX3Q5HYI7 312 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 RNF187Q5TA31 235 aaPredicted RBP3.57□□□□□ -1.84
CHD2-203ENST00000625243 B3GNTL1Q67FW5 361 aaPredicted RBP3.57□□□□□ -1.84
CHD2-203ENST00000625243 ESRP1Q6NXG1 681 aaKnown RBP3.57□□□□□ -1.84
CHD2-203ENST00000625243 ZNF517Q6ZMY9 492 aaPredicted RBP3.57□□□□□ -1.84
CHD2-203ENST00000625243 C16orf86Q6ZW13 317 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 MYPNQ86TC9 1320 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 DDX53Q86TM3 631 aaKnown RBP3.57□□□□□ -1.84
CHD2-203ENST00000625243 CHST14Q8NCH0 376 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 ZFP28Q8NHY6 868 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 HASPINQ8TF76 798 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 FUBP1Q96AE4 644 aaKnown RBP3.57□□□□□ -1.84
CHD2-203ENST00000625243 RNF31Q96EP0 1072 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 CDC5LQ99459 802 aaKnown RBP3.57□□□□□ -1.84
CHD2-203ENST00000625243 CPNE5Q9HCH3 593 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 KLHL11Q9NVR0 708 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 ZNF580Q9UK33 172 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 PCDHB6Q9Y5E3 794 aa3.57□□□□□ -1.84
CHD2-203ENST00000625243 ZNF521Q96K83 1311 aa3.56□□□□□ -1.84
CHD2-203ENST00000625243 PTPDC1A2A3K4 754 aa3.56□□□□□ -1.84
CHD2-203ENST00000625243 DRGXA6NNA5 263 aa3.56□□□□□ -1.84
CHD2-203ENST00000625243 ENPP3O14638 875 aa3.56□□□□□ -1.84
CHD2-203ENST00000625243 HMGB1P09429 215 aaKnown RBP3.56□□□□□ -1.84
CHD2-203ENST00000625243 SLC9A1P19634 815 aa3.56□□□□□ -1.84
CHD2-203ENST00000625243 TKTP29401 623 aaKnown RBP3.56□□□□□ -1.84
CHD2-203ENST00000625243 EXOSC10Q01780 885 aaKnown RBP3.56□□□□□ -1.84
CHD2-203ENST00000625243 EIF2B5Q13144 721 aaKnown RBP3.56□□□□□ -1.84
CHD2-203ENST00000625243 UBE3CQ15386 1083 aa3.56□□□□□ -1.84
CHD2-203ENST00000625243 TSHZ3Q63HK5 1081 aa3.56□□□□□ -1.84
CHD2-203ENST00000625243 RHOT2Q8IXI1 618 aa3.56□□□□□ -1.84
CHD2-203ENST00000625243 JMYQ8N9B5 988 aa3.56□□□□□ -1.84
CHD2-203ENST00000625243 RTF1Q92541 710 aaKnown RBP3.56□□□□□ -1.84
CHD2-203ENST00000625243 RGMAQ96B86 450 aa3.56□□□□□ -1.84
CHD2-203ENST00000625243 ZNF48Q96MX3 618 aaPredicted RBP3.56□□□□□ -1.84
CHD2-203ENST00000625243 ELF4Q99607 663 aaPredicted RBP3.56□□□□□ -1.84
CHD2-203ENST00000625243 FANCLQ9NW38 375 aa3.56□□□□□ -1.84
CHD2-203ENST00000625243 USP18Q9UMW8 372 aa3.56□□□□□ -1.84
CHD2-203ENST00000625243 DMTF1Q9Y222 760 aa3.56□□□□□ -1.84
CHD2-203ENST00000625243 A0A1W2PR48 441 aa3.55□□□□□ -1.84
CHD2-203ENST00000625243 ANKRD62A6NC57 917 aa3.55□□□□□ -1.84
CHD2-203ENST00000625243 CYSRT1A8MQ03 144 aa3.55□□□□□ -1.84
CHD2-203ENST00000625243 SEC24DO94855 1032 aaPredicted RBP3.55□□□□□ -1.84
CHD2-203ENST00000625243 PRKCGP05129 697 aa3.55□□□□□ -1.84
CHD2-203ENST00000625243 GPD1P21695 349 aa3.55□□□□□ -1.84
CHD2-203ENST00000625243 IBSPP21815 317 aaPredicted RBP3.55□□□□□ -1.84
CHD2-203ENST00000625243 ITPKBP27987 946 aa3.55□□□□□ -1.84
CHD2-203ENST00000625243 EGFLAMQ63HQ2 1017 aa3.55□□□□□ -1.84
CHD2-203ENST00000625243 JAZF1Q86VZ6 243 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms