RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 PI4K2BG5E9Z4 385 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 ACKR2O00590 384 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 DDHD2O94830 711 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 CTSAP10619 480 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 SLC11A1P49279 550 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 POSTNQ15063 836 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 ZRSR1Q15695 479 aaKnown RBP13.9□□□□□ -0.18
PNKP-217ENST00000625216 KCNK18Q7Z418 384 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 ELOA2Q8IYF1 753 aaPredicted RBP13.9□□□□□ -0.18
PNKP-217ENST00000625216 IQUBQ8NA54 791 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 RASSF8Q8NHQ8 419 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 DEPTORQ8TB45 409 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 CASP10Q92851 521 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 CALML4Q96GE6 196 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 PYM1Q9BRP8 204 aaKnown RBP13.9□□□□□ -0.18
PNKP-217ENST00000625216 GBP3Q9H0R5 595 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 ZBP1Q9H171 429 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 RNF39Q9H2S5 420 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 BLOC1S4Q9NUP1 217 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 DNAJB4Q9UDY4 337 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 CCDC39Q9UFE4 941 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 ZMYM2Q9UBW7 1377 aa13.9□□□□□ -0.18
PNKP-217ENST00000625216 NRP1O14786 923 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 N4BP3O15049 544 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 B4GALT5O43286 388 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 POMCP01189 267 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 ALADP13716 330 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 CASP1P29466 404 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 AFF1P51825 1210 aaKnown RBP13.89□□□□□ -0.19
PNKP-217ENST00000625216 PRPF4BQ13523 1007 aaKnown RBP13.89□□□□□ -0.19
PNKP-217ENST00000625216 TMEM173Q86WV6 379 aaPredicted RBP13.89□□□□□ -0.19
PNKP-217ENST00000625216 CEP57L1Q8IYX8 460 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 STAMQ92783 540 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 PAGE5Q96GU1 130 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 GAD1Q99259 594 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 TIPINQ9BVW5 301 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 NT5C3AQ9H0P0 336 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 C17orf75Q9HAS0 396 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 KIAA1468Q9P260 1216 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 KCNG1Q9UIX4 513 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 BARX2Q9UMQ3 279 aaPredicted RBP13.89□□□□□ -0.19
PNKP-217ENST00000625216 PHLPP2Q6ZVD8 1323 aa13.89□□□□□ -0.19
PNKP-217ENST00000625216 SLC26A4O43511 780 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 NPTXRO95502 500 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 PRKCBP05771 671 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 MLH1P40692 756 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 AFMP43652 599 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 TYRO3Q06418 890 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 DSC1Q08554 894 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 GSE1Q14687 1217 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 ANKRD54Q6NXT1 300 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 PPFIBP1Q86W92 1011 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 COLGALT2Q8IYK4 626 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 VN1R2Q8NFZ6 395 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 BSNDQ8WZ55 320 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 CDK5RAP3Q96JB5 506 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 ADPGKQ9BRR6 497 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 CCDC113Q9H0I3 377 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 CUEDC2Q9H467 287 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 TSPY26PQ9H489 355 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 NXF3Q9H4D5 531 aaKnown RBP13.88□□□□□ -0.19
PNKP-217ENST00000625216 EPHX3Q9H6B9 360 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 STK17AQ9UEE5 414 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 SSX2IPQ9Y2D8 614 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 USP15Q9Y4E8 981 aaPredicted RBP13.88□□□□□ -0.19
PNKP-217ENST00000625216 HES2Q9Y543 173 aa13.88□□□□□ -0.19
PNKP-217ENST00000625216 KIAA1671Q9BY89 1806 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.87□□□□□ -0.19
PNKP-217ENST00000625216 E9PMD0 336 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 K7ERI5 159 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 B4GALT3O60512 393 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 CLASP2O75122 1294 aaKnown RBP13.87□□□□□ -0.19
PNKP-217ENST00000625216 OR1G1P47890 313 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 DPYDQ12882 1025 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 TMEM132AQ24JP5 1023 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 KANK3Q6NY19 840 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 APBB1IPQ7Z5R6 666 aaPredicted RBP13.87□□□□□ -0.19
PNKP-217ENST00000625216 BCL7CQ8WUZ0 217 aaPredicted RBP13.87□□□□□ -0.19
PNKP-217ENST00000625216 SUSD6Q92537 303 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 RAD54LQ92698 747 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 DRC1Q96MC2 740 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 COLEC11Q9BWP8 271 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 APOL6Q9BWW8 343 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 PHF7Q9BWX1 381 aaPredicted RBP13.87□□□□□ -0.19
PNKP-217ENST00000625216 EMILIN2Q9BXX0 1053 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 S1PR5Q9H228 398 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 MAGEF1Q9HAY2 307 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 KBTBD4Q9NVX7 518 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 PARP2Q9UGN5 583 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 PCDHA5Q9Y5H7 936 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 HCFC2Q9Y5Z7 792 aa13.87□□□□□ -0.19
PNKP-217ENST00000625216 MYH11P35749 1972 aa13.86□□□□□ -0.19
PNKP-217ENST00000625216 GPR37L1O60883 481 aa13.86□□□□□ -0.19
PNKP-217ENST00000625216 SOD2P04179 222 aa13.86□□□□□ -0.19
PNKP-217ENST00000625216 CCDC192P0DO97 292 aa13.86□□□□□ -0.19
PNKP-217ENST00000625216 AKAP5P24588 427 aa13.86□□□□□ -0.19
PNKP-217ENST00000625216 GUCY2CP25092 1073 aa13.86□□□□□ -0.19
PNKP-217ENST00000625216 CA8P35219 290 aa13.86□□□□□ -0.19
PNKP-217ENST00000625216 SCNN1GP51170 649 aa13.86□□□□□ -0.19
PNKP-217ENST00000625216 RBM10P98175 930 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms