RNA–Protein interactions for RNA: ENST00000624949.1

PCDHB12-203, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 1,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-203ENST00000624949 C1orf220Q5T0J3 134 aa22.11■■□□□ 1.13
PCDHB12-203ENST00000624949 ARMC5Q96C12 935 aa22.11■■□□□ 1.13
PCDHB12-203ENST00000624949 NOC2LQ9Y3T9 749 aaKnown RBP22.11■■□□□ 1.13
PCDHB12-203ENST00000624949 GYPCP04921 128 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 TRIM21P19474 475 aaKnown RBP22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 HOXA11P31270 313 aaPredicted RBP22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 ADKP55263 362 aaKnown RBP22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 WNT7BP56706 349 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 RPAINQ86UA6 219 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 FAM212AQ96EL1 285 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 ADPGKQ9BRR6 497 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 PDE11AQ9HCR9 933 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 TOPORSQ9NS56 1045 aaPredicted RBP22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 PIN4Q9Y237 131 aaKnown RBP22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 R3HCC1Q9Y3T6 440 aaKnown RBP22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 RPLP2P05387 115 aaKnown RBP22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 SKILP12757 684 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 CASP14P31944 242 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 MGAT3Q09327 533 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 PCBP1Q15365 356 aaKnown RBP eCLIP22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 LMBRD2Q68DH5 695 aaPredicted RBP22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 USP37Q86T82 979 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 FAM228AQ86W67 206 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 TMC2Q8TDI7 906 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 FNBP1Q96RU3 617 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 LSM14BQ9BX40 385 aaKnown RBP22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 CRISPLD2Q9H0B8 497 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 AGPAT5Q9NUQ2 364 aa22.1■■□□□ 1.13
PCDHB12-203ENST00000624949 MCF2P10911 925 aa22.09■■□□□ 1.13
PCDHB12-203ENST00000624949 ATN1P54259 1190 aaPredicted RBP22.09■■□□□ 1.13
PCDHB12-203ENST00000624949 MYL7Q01449 175 aa22.09■■□□□ 1.13
PCDHB12-203ENST00000624949 APBA1Q02410 837 aa22.09■■□□□ 1.13
PCDHB12-203ENST00000624949 HSP90AA2PQ14568 343 aaPredicted RBP22.09■■□□□ 1.13
PCDHB12-203ENST00000624949 PSMD6Q15008 389 aa22.09■■□□□ 1.13
PCDHB12-203ENST00000624949 EXOC3L4Q17RC7 722 aa22.09■■□□□ 1.13
PCDHB12-203ENST00000624949 NOTUMQ6P988 496 aa22.09■■□□□ 1.13
PCDHB12-203ENST00000624949 TMEM192Q8IY95 271 aa22.09■■□□□ 1.13
PCDHB12-203ENST00000624949 FAM84AQ96KN4 292 aa22.09■■□□□ 1.13
PCDHB12-203ENST00000624949 GCNT4Q9P109 453 aa22.09■■□□□ 1.13
PCDHB12-203ENST00000624949 CPSF3Q9UKF6 684 aaKnown RBP22.09■■□□□ 1.13
PCDHB12-203ENST00000624949 RPS6KA5O75582 802 aa22.08■■□□□ 1.13
PCDHB12-203ENST00000624949 NPTXRO95502 500 aa22.08■■□□□ 1.13
PCDHB12-203ENST00000624949 TPM1P09493 284 aa22.08■■□□□ 1.13
PCDHB12-203ENST00000624949 SLC9A1P19634 815 aa22.08■■□□□ 1.13
PCDHB12-203ENST00000624949 FXR1P51114 621 aaKnown RBP eCLIP22.08■■□□□ 1.13
PCDHB12-203ENST00000624949 TRIM71Q2Q1W2 868 aaKnown RBP22.08■■□□□ 1.13
PCDHB12-203ENST00000624949 GBP6Q6ZN66 633 aa22.08■■□□□ 1.13
PCDHB12-203ENST00000624949 RNF225M0QZC1 329 aaPredicted RBP22.08■■□□□ 1.12
PCDHB12-203ENST00000624949 EPHB6O15197 1021 aa22.08■■□□□ 1.12
PCDHB12-203ENST00000624949 TNNI1P19237 187 aa22.08■■□□□ 1.12
PCDHB12-203ENST00000624949 CDK7P50613 346 aa22.08■■□□□ 1.12
PCDHB12-203ENST00000624949 NFX1Q12986 1120 aaKnown RBP22.08■■□□□ 1.12
PCDHB12-203ENST00000624949 ZNF618Q5T7W0 954 aa22.08■■□□□ 1.12
PCDHB12-203ENST00000624949 SLC27A1Q6PCB7 646 aa22.08■■□□□ 1.12
PCDHB12-203ENST00000624949 BRSK2Q8IWQ3 736 aa22.08■■□□□ 1.12
PCDHB12-203ENST00000624949 NEK11Q8NG66 645 aa22.08■■□□□ 1.12
PCDHB12-203ENST00000624949 OSBPL7Q9BZF2 842 aa22.08■■□□□ 1.12
PCDHB12-203ENST00000624949 TTC26A0AVF1 554 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 AKR1B15C9JRZ8 316 aaPredicted RBP22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 STAG3L1P0CL83 205 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 ACTN1P12814 892 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 TRIM14Q14142 442 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 CCDC150Q8NCX0 1101 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 NUP58Q9BVL2 599 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 EIF2AQ9BY44 585 aaKnown RBP22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 TMEM117Q9H0C3 514 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 ST3GAL5Q9UNP4 418 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 STX10O60499 249 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 CXCL8P10145 99 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 CKBP12277 381 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 PON1P27169 355 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 AXLP30530 894 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 MNX1P50219 401 aaPredicted RBP22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 MXI1P50539 228 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 DNTTIP2Q5QJE6 756 aaKnown RBP22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 TC2NQ8N9U0 490 aa22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 TRIM6Q9C030 488 aaPredicted RBP22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 RPF1Q9H9Y2 349 aaKnown RBP22.07■■□□□ 1.12
PCDHB12-203ENST00000624949 PQBP1O60828 265 aaKnown RBP22.06■■□□□ 1.12
PCDHB12-203ENST00000624949 GHRP10912 638 aa22.06■■□□□ 1.12
PCDHB12-203ENST00000624949 PTPRJQ12913 1337 aa22.06■■□□□ 1.12
PCDHB12-203ENST00000624949 ENOX2Q16206 610 aaKnown RBP22.06■■□□□ 1.12
PCDHB12-203ENST00000624949 FAM126BQ8IXS8 530 aa22.06■■□□□ 1.12
PCDHB12-203ENST00000624949 DIS3LQ8TF46 1054 aaKnown RBP22.06■■□□□ 1.12
PCDHB12-203ENST00000624949 ZNF516Q92618 1163 aa22.06■■□□□ 1.12
PCDHB12-203ENST00000624949 GTPBP10A4D1E9 387 aaKnown RBP22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 N4BP1O75113 896 aaKnown RBP22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 MFAP3LO75121 409 aa22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 MCCD1P59942 119 aaPredicted RBP22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 DCAF4L1Q3SXM0 396 aa22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 KRT39Q6A163 491 aa22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 TTYH3Q9C0H2 523 aa22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 AGO3Q9H9G7 860 aaKnown RBP22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 TMEM8AQ9HCN3 771 aa22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 CLTAP09496 248 aa22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 GJA8P48165 433 aa22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 CETN1Q12798 172 aa22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 FBXO47Q5MNV8 452 aa22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 APBB1IPQ7Z5R6 666 aaPredicted RBP22.05■■□□□ 1.12
PCDHB12-203ENST00000624949 SEZ6LQ9BYH1 1024 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms