RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 TRAPPC10P48553 1259 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 PRPF4BQ13523 1007 aaKnown RBP17.16■□□□□ 0.34
ATRX-217ENST00000624668 IL17AQ16552 155 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 RTP2Q5QGT7 225 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 PRSS55Q6UWB4 352 aaPredicted RBP17.16■□□□□ 0.34
ATRX-217ENST00000624668 PALB2Q86YC2 1186 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 GLYCTKQ8IVS8 523 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 ZBTB8OSQ8IWT0 167 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 HASPINQ8TF76 798 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 C2orf40Q9H1Z8 148 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 BHMT2Q9H2M3 363 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 SH2B1Q9NRF2 756 aaPredicted RBP17.16■□□□□ 0.34
ATRX-217ENST00000624668 SSX2IPQ9Y2D8 614 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 PCDHB6Q9Y5E3 794 aa17.16■□□□□ 0.34
ATRX-217ENST00000624668 CCDC195A0A1B0GUA6 201 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 PP2D1A8MPX8 630 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 ACKR2O00590 384 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 N4BP3O15049 544 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 TGM5O43548 720 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 NR1I2O75469 434 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 RECQL4O94761 1208 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 KIF4AO95239 1232 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 PAPLNO95428 1278 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 PTPN5P54829 565 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 PTGDRQ13258 359 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 TUSC3Q13454 348 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 HSP90AA2PQ14568 343 aaPredicted RBP17.15■□□□□ 0.34
ATRX-217ENST00000624668 MAPK6Q16659 721 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 USP41Q3LFD5 358 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 NT5DC1Q5TFE4 455 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 LILRA6Q6PI73 481 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 PLCD3Q8N3E9 789 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 IGSF22Q8N9C0 903 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 FAM184AQ8NB25 1140 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 DEPTORQ8TB45 409 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 RIN2Q8WYP3 895 aaPredicted RBP17.15■□□□□ 0.34
ATRX-217ENST00000624668 LRWD1Q9UFC0 647 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 KIAA1024Q9UPX6 916 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 CFAP54Q96N23 3096 aa17.15■□□□□ 0.34
ATRX-217ENST00000624668 MUTP22033 750 aa17.14■□□□□ 0.33
ATRX-217ENST00000624668 GNL2Q13823 731 aaKnown RBP17.14■□□□□ 0.33
ATRX-217ENST00000624668 HAUS3Q68CZ6 603 aa17.14■□□□□ 0.33
ATRX-217ENST00000624668 OTOP3Q7RTS5 596 aa17.14■□□□□ 0.33
ATRX-217ENST00000624668 DAW1Q8N136 415 aa17.14■□□□□ 0.33
ATRX-217ENST00000624668 TMEM105Q8N8V8 129 aa17.14■□□□□ 0.33
ATRX-217ENST00000624668 WDR6Q9NNW5 1121 aaKnown RBP17.14■□□□□ 0.33
ATRX-217ENST00000624668 DDX19AQ9NUU7 478 aaKnown RBP17.14■□□□□ 0.33
ATRX-217ENST00000624668 FAM86C1Q9NVL1 165 aa17.14■□□□□ 0.33
ATRX-217ENST00000624668 TADA2AO75478 443 aa17.13■□□□□ 0.33
ATRX-217ENST00000624668 CDC25AP30304 524 aa17.13■□□□□ 0.33
ATRX-217ENST00000624668 KCNK18Q7Z418 384 aa17.13■□□□□ 0.33
ATRX-217ENST00000624668 GPR65Q8IYL9 337 aa17.13■□□□□ 0.33
ATRX-217ENST00000624668 ACSF2Q96CM8 615 aaPredicted RBP17.13■□□□□ 0.33
ATRX-217ENST00000624668 MYADMQ96S97 322 aa17.13■□□□□ 0.33
ATRX-217ENST00000624668 MMTAG2Q9BU76 263 aaKnown RBP17.13■□□□□ 0.33
ATRX-217ENST00000624668 RHOBTB2Q9BYZ6 727 aa17.13■□□□□ 0.33
ATRX-217ENST00000624668 KCNK12Q9HB15 430 aa17.13■□□□□ 0.33
ATRX-217ENST00000624668 FNIP2Q9P278 1114 aa17.13■□□□□ 0.33
ATRX-217ENST00000624668 NOL7Q9UMY1 257 aaKnown RBP17.13■□□□□ 0.33
ATRX-217ENST00000624668 GDAQ9Y2T3 454 aa17.13■□□□□ 0.33
ATRX-217ENST00000624668 CLUHO75153 1309 aa17.13■□□□□ 0.33
ATRX-217ENST00000624668 ZFHX2Q9C0A1 2572 aaPredicted RBP17.12■□□□□ 0.33
ATRX-217ENST00000624668 E9PMD0 336 aa17.12■□□□□ 0.33
ATRX-217ENST00000624668 ADAM12O43184 909 aa17.12■□□□□ 0.33
ATRX-217ENST00000624668 THP07101 528 aa17.12■□□□□ 0.33
ATRX-217ENST00000624668 MAPK7Q13164 816 aa17.12■□□□□ 0.33
ATRX-217ENST00000624668 PDIA5Q14554 519 aa17.12■□□□□ 0.33
ATRX-217ENST00000624668 SNX29Q8TEQ0 813 aa17.12■□□□□ 0.33
ATRX-217ENST00000624668 HDAC7Q8WUI4 952 aa17.12■□□□□ 0.33
ATRX-217ENST00000624668 RSAD2Q8WXG1 361 aa17.12■□□□□ 0.33
ATRX-217ENST00000624668 SMG7Q92540 1137 aaKnown RBP17.12■□□□□ 0.33
ATRX-217ENST00000624668 KIFAP3Q92845 792 aa17.12■□□□□ 0.33
ATRX-217ENST00000624668 PRRX2Q99811 253 aa17.12■□□□□ 0.33
ATRX-217ENST00000624668 RUSC1Q9BVN2 902 aa17.12■□□□□ 0.33
ATRX-217ENST00000624668 NT5C3AQ9H0P0 336 aa17.12■□□□□ 0.33
ATRX-217ENST00000624668 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.12■□□□□ 0.33
ATRX-217ENST00000624668 SF3B1O75533 1304 aaKnown RBP eCLIP17.12■□□□□ 0.336e-6■■■■■ 63.9
ATRX-217ENST00000624668 NARSO43776 548 aaKnown RBP17.11■□□□□ 0.33
ATRX-217ENST00000624668 CD2BP2O95400 341 aaKnown RBP17.11■□□□□ 0.33
ATRX-217ENST00000624668 C1RP00736 705 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 TDGQ13569 410 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 PPP2R5AQ15172 486 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 TMEM132AQ24JP5 1023 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 GLRA4Q5JXX5 417 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 ATF7IP2Q5U623 682 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 CWF19L1Q69YN2 538 aaKnown RBP17.11■□□□□ 0.33
ATRX-217ENST00000624668 CD300LGQ6UXG3 332 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 CYP26C1Q6V0L0 522 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 TAS1R3Q7RTX0 852 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 CEP120Q8N960 986 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 LNX1Q8TBB1 728 aaPredicted RBP17.11■□□□□ 0.33
ATRX-217ENST00000624668 PIK3R5Q8WYR1 880 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 CLSTN3Q9BQT9 956 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 ADPGKQ9BRR6 497 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 PLEKHA4Q9H4M7 779 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.11■□□□□ 0.33
ATRX-217ENST00000624668 WDR87Q6ZQQ6 2873 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 VWA8A3KMH1 1905 aa17.11■□□□□ 0.33
ATRX-217ENST00000624668 MTCL1Q9Y4B5 1905 aaKnown RBP17.11■□□□□ 0.33
ATRX-217ENST00000624668 DOCK8Q8NF50 2099 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms