RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 NRP1O14786 923 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 CLDN3O15551 220 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 NCK2O43639 380 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 B4GALT3O60512 393 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 REV3LO60673 3130 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 GRM5P41594 1212 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 NRIP1P48552 1158 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 TFF2Q03403 129 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 NOLC1Q14978 699 aaKnown RBP eCLIP15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 HERC4Q5GLZ8 1057 aaPredicted RBP15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 RESP18Q5W5W9 173 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 TMEM173Q86WV6 379 aaPredicted RBP15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 COLGALT2Q8IYK4 626 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 VPS52Q8N1B4 723 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 ZBTB45Q96K62 511 aaPredicted RBP15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 ACAP3Q96P50 834 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 TNMDQ9H2S6 317 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 TLE6Q9H808 572 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 UBE2ZQ9H832 354 aaPredicted RBP15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 PANK4Q9NVE7 773 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 TBC1D7Q9P0N9 293 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 SEL1LQ9UBV2 794 aa15.3■□□□□ 0.04
PCDHGC3-208ENST00000622836 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 THP07101 528 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 KCNA5P22460 613 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 ASIC1P78348 528 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 HYAL1Q12794 435 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 TUSC3Q13454 348 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 SMC1AQ14683 1233 aaKnown RBP15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 E2F4Q16254 413 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 ADGRD2Q7Z7M1 963 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 DDX53Q86TM3 631 aaKnown RBP15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 CCDC65Q8IXS2 484 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 CEP57L1Q8IYX8 460 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 CEP120Q8N960 986 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 GSTCDQ8NEC7 633 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 DNAJC19Q96DA6 116 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 PABPC5Q96DU9 382 aaKnown RBP15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 COLEC11Q9BWP8 271 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 MAGEF1Q9HAY2 307 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 PTPRHQ9HD43 1115 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 NGRNQ9NPE2 291 aaKnown RBP15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 STK39Q9UEW8 545 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 KCNH3Q9ULD8 1083 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 UNC80Q8N2C7 3258 aa15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 TDRD15B5MCY1 1934 aaKnown RBP15.29■□□□□ 0.04
PCDHGC3-208ENST00000622836 CASTOR2A6NHX0 329 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 FSCN2O14926 492 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 PER2O15055 1255 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 GCNT3O95395 438 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 PROZP22891 400 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 GTF2F1P35269 517 aaKnown RBP eCLIP15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 GTF2BQ00403 316 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 DSC1Q08554 894 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 ZC2HC1CQ53FD0 456 aaPredicted RBP15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 TJAP1Q5JTD0 557 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 GLRA4Q5JXX5 417 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 ADALQ6DHV7 355 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 BCL7CQ8WUZ0 217 aaPredicted RBP15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 ASB2Q96Q27 587 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 FIZ1Q96SL8 496 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 KBTBD4Q9NVX7 518 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 BRWD1Q9NSI6 2320 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 A0A0C4DFX4 3053 aa15.28■□□□□ 0.04
PCDHGC3-208ENST00000622836 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 A0A1B0GVL5 298 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 PTGESO14684 152 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 CXCL14O95715 111 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 CMA1P23946 247 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 ANP32AP39687 249 aaKnown RBP15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 NDUFV1P49821 464 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 MCL1Q07820 350 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 SEZ6Q53EL9 994 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 ZNF720Q7Z2F6 126 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 MAP4K3Q8IVH8 894 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 RABGGTAQ92696 567 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 MSTO1Q9BUK6 570 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 TRIM9Q9C026 710 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 ST6GALNAC4Q9H4F1 302 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 EXOC7Q9UPT5 735 aa15.27■□□□□ 0.04
PCDHGC3-208ENST00000622836 ATG2AQ2TAZ0 1938 aa15.27■□□□□ 0.03
PCDHGC3-208ENST00000622836 FSD2A1L4K1 749 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 HIDE1A8MVS5 230 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 H3BQ06 376 aaPredicted RBP15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 ABLIM1O14639 778 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 TADA2AO75478 443 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 PIGRP01833 764 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 SRGAP2BP0DMP2 458 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 PFKFB1P16118 471 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 AFMP43652 599 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 KCNQ1P51787 676 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 COASYQ13057 564 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 KIAA1841Q6NSI8 718 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 STXBP4Q6ZWJ1 553 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 SYCP3Q8IZU3 236 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 MRPL43Q8N983 215 aaKnown RBP15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 KCNN1Q92952 543 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 HVCN1Q96D96 273 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 SNX27Q96L92 541 aa15.26■□□□□ 0.03
PCDHGC3-208ENST00000622836 ACCSQ96QU6 501 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms