RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, human

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3A-222	ENST00000621967	ELN	P15502	786 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	ACVR2B	Q13705	512 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	ODR4	Q5SWX8	454 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	KCNV1	Q6PIU1	500 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	RIT2	Q99578	217 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	LXN	Q9BS40	222 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	INTS2	Q9H0H0	1204 aa	Known RBP	18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	PLEKHA4	Q9H4M7	779 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	SPATA31C2	B4DYI2	1134 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	KRT14	P02533	472 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	RFX1	P22670	979 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	ICAM3	P32942	547 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	GUCY2F	P51841	1108 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	LBX1	P52954	281 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	SLC20A2	Q08357	652 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	TTLL4	Q14679	1199 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	DAW1	Q8N136	415 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	TMEM174	Q8WUU8	243 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	RFFL	Q8WZ73	363 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	APEX2	Q9UBZ4	518 aa		18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	TTC7A	Q9ULT0	858 aa	Predicted RBP	18.84	■□□□□ 0.61
FAM3A-222	ENST00000621967	SART1	O43290	800 aa	Known RBP	18.83	■□□□□ 0.6
FAM3A-222	ENST00000621967	TGFB3	P10600	412 aa		18.83	■□□□□ 0.6
FAM3A-222	ENST00000621967	CYP2J2	P51589	502 aa		18.83	■□□□□ 0.6
FAM3A-222	ENST00000621967	BFSP1	Q12934	665 aa		18.83	■□□□□ 0.6
FAM3A-222	ENST00000621967	DAAM2	Q86T65	1068 aa		18.83	■□□□□ 0.6
FAM3A-222	ENST00000621967	GLYCTK	Q8IVS8	523 aa		18.83	■□□□□ 0.6
FAM3A-222	ENST00000621967	KATNBL1	Q9H079	304 aa		18.83	■□□□□ 0.6
FAM3A-222	ENST00000621967	SLITRK6	Q9H5Y7	841 aa		18.83	■□□□□ 0.6
FAM3A-222	ENST00000621967	TCEAL9	Q9UHQ7	104 aa		18.83	■□□□□ 0.6
FAM3A-222	ENST00000621967	TMCO5B	A8MYB1	307 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	HIP1R	O75146	1068 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	HMGCR	P04035	888 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	CCDC172	P0C7W6	258 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	TRIM49	P0CI25	452 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	TRIM49C	P0CI26	452 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	GNGT1	P63211	74 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	MYL7	Q01449	175 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	PRAMEF19	Q5SWL8	479 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	KDM7A	Q6ZMT4	941 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	SLAIN1	Q8ND83	568 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	BANK1	Q8NDB2	785 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	LMO3	Q8TAP4	145 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	PXYLP1	Q8TE99	480 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	PDGFC	Q9NRA1	345 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	TBC1D22B	Q9NU19	505 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	CENPF	P49454	3210 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	ARHGEF35	A5YM69	484 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	DDX39A	O00148	427 aa	Known RBP	18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	TRIM66	O15016	1216 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	ATP9A	O75110	1047 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	TXN	P10599	105 aa	Known RBP	18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	ITGB3BP	Q13352	177 aa	Predicted RBP	18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	DNAJC21	Q5F1R6	531 aa	Known RBP	18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	TAPT1	Q6NXT6	567 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	LRIG3	Q6UXM1	1119 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	SEC14L1	Q92503	715 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	AP1M1	Q9BXS5	423 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	AMFR	Q9UKV5	643 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	PTCH2	Q9Y6C5	1203 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	HTT	P42858	3142 aa		18.82	■□□□□ 0.6
FAM3A-222	ENST00000621967	IGSF9B	Q9UPX0	1349 aa		18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	KRIT1	O00522	736 aa		18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	BUB1B	O60566	1050 aa	Predicted RBP	18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	IGHA2	P01877	340 aa		18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	MAPT	P10636	758 aa	Known RBP	18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	KCNA2	P16389	499 aa		18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	UBA1	P22314	1058 aa	Known RBP	18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	ADCYAP1R1	P41586	468 aa		18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	CORO7	P57737	925 aa		18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	NEDD9	Q14511	834 aa		18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	PTPRO	Q16827	1216 aa		18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	SLC35G2	Q8TBE7	412 aa		18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	SENP7	Q9BQF6	1050 aa		18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	DDX47	Q9H0S4	455 aa	Known RBP	18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	RASSF4	Q9H2L5	321 aa		18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	OSGEP	Q9NPF4	335 aa		18.81	■□□□□ 0.6
FAM3A-222	ENST00000621967	DDX3Y	O15523	660 aa	Known RBP	18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	ARIH2	O95376	493 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	ALCAM	Q13740	583 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	LY6K	Q17RY6	165 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	C12orf56	Q8IXR9	622 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	SH2D3C	Q8N5H7	860 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	RBM47	A0AV96	593 aa	Known RBP	18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	EXOC3	O60645	756 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	ITGA4	P13612	1032 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	PRKAR2A	P13861	404 aa	Known RBP	18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	GRK4	P32298	578 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	SP2	Q02086	613 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	PHLDB3	Q6NSJ2	640 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	C10orf67	Q8IYJ2	551 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	ATP6V1G3	Q96LB4	118 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	JPH1	Q9HDC5	661 aa	Predicted RBP	18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	PTPN22	Q9Y2R2	807 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	NFASC	O94856	1347 aa		18.8	■□□□□ 0.6
FAM3A-222	ENST00000621967	SORBS3	O60504	671 aa		18.79	■□□□□ 0.6
FAM3A-222	ENST00000621967	GGPS1	O95749	300 aa		18.79	■□□□□ 0.6
FAM3A-222	ENST00000621967	HADHB	P55084	474 aa	Known RBP	18.79	■□□□□ 0.6

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