RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 MYO7AQ13402 2215 aa15.66■□□□□ 0.1
CBWD3-217ENST00000621474 A0A0B4J269 797 aa15.66■□□□□ 0.1
CBWD3-217ENST00000621474 CLDN3O15551 220 aa15.66■□□□□ 0.1
CBWD3-217ENST00000621474 GRM5P41594 1212 aa15.66■□□□□ 0.1
CBWD3-217ENST00000621474 EPC2Q52LR7 807 aa15.66■□□□□ 0.1
CBWD3-217ENST00000621474 NOMO2Q5JPE7 1267 aa15.66■□□□□ 0.1
CBWD3-217ENST00000621474 ZBTB41Q5SVQ8 909 aa15.66■□□□□ 0.1
CBWD3-217ENST00000621474 ELOA2Q8IYF1 753 aaPredicted RBP15.66■□□□□ 0.1
CBWD3-217ENST00000621474 DEFB123Q8N688 67 aa15.66■□□□□ 0.1
CBWD3-217ENST00000621474 TCHPQ9BT92 498 aa15.66■□□□□ 0.1
CBWD3-217ENST00000621474 KLK14Q9P0G3 267 aa15.66■□□□□ 0.1
CBWD3-217ENST00000621474 GDAQ9Y2T3 454 aa15.66■□□□□ 0.1
CBWD3-217ENST00000621474 C5orf67F2Z3F1 127 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 RFXAPO00287 272 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 PTGESO14684 152 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 LPXNO60711 386 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 DDHD2O94830 711 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 POMCP01189 267 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 HARSP12081 509 aaKnown RBP15.65■□□□□ 0.1
CBWD3-217ENST00000621474 PBX3P40426 434 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 TNFSF9P41273 254 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 SCNN1GP51170 649 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 OSTNP61366 133 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 NAB2Q15742 525 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 BMT2Q1RMZ1 405 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 ALKAL1Q6UXT8 129 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 ZNF280BQ86YH2 543 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 THNSL1Q8IYQ7 743 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 ARNTL2Q8WYA1 636 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 RSPH1Q8WYR4 309 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 GBP4Q96PP9 640 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 ACCSQ96QU6 501 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 UBN1Q9NPG3 1134 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 EXOC1Q9NV70 894 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 MTMR10Q9NXD2 777 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 PARP2Q9UGN5 583 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 PRRC2BQ5JSZ5 2229 aaKnown RBP15.65■□□□□ 0.1
CBWD3-217ENST00000621474 TGFB1I1O43294 461 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 KINO60870 393 aaKnown RBP15.65■□□□□ 0.1
CBWD3-217ENST00000621474 BMPR1AP36894 532 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 KCNB1Q14721 858 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 XKR4Q5GH76 650 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 ZSWIM2Q8NEG5 633 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 MRPL9Q9BYD2 267 aaKnown RBP15.65■□□□□ 0.1
CBWD3-217ENST00000621474 PRDM12Q9H4Q4 367 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 NRDE2Q9H7Z3 1164 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 DNAJB4Q9UDY4 337 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 PCDHA5Q9Y5H7 936 aa15.65■□□□□ 0.1
CBWD3-217ENST00000621474 DSC1Q08554 894 aa15.64■□□□□ 0.09
CBWD3-217ENST00000621474 PSMD2Q13200 908 aa15.64■□□□□ 0.09
CBWD3-217ENST00000621474 SLC10A6Q3KNW5 377 aa15.64■□□□□ 0.09
CBWD3-217ENST00000621474 HACE1Q8IYU2 909 aa15.64■□□□□ 0.09
CBWD3-217ENST00000621474 CBWD1Q9BRT8 395 aa15.64■□□□□ 0.09
CBWD3-217ENST00000621474 TMEM206Q9H813 350 aa15.64■□□□□ 0.09
CBWD3-217ENST00000621474 EXOC7Q9UPT5 735 aa15.64■□□□□ 0.09
CBWD3-217ENST00000621474 UBE4BO95155 1302 aa15.64■□□□□ 0.09
CBWD3-217ENST00000621474 OGTO15294 1046 aa15.63■□□□□ 0.09
CBWD3-217ENST00000621474 CTNNB1P35222 781 aa15.63■□□□□ 0.09
CBWD3-217ENST00000621474 ADGRE1Q14246 886 aa15.63■□□□□ 0.09
CBWD3-217ENST00000621474 CRELD2Q6UXH1 353 aaPredicted RBP15.63■□□□□ 0.09
CBWD3-217ENST00000621474 APBB1IPQ7Z5R6 666 aaPredicted RBP15.63■□□□□ 0.09
CBWD3-217ENST00000621474 TMEM173Q86WV6 379 aaPredicted RBP15.63■□□□□ 0.09
CBWD3-217ENST00000621474 NELFCDQ8IXH7 590 aa15.63■□□□□ 0.09
CBWD3-217ENST00000621474 COLGALT2Q8IYK4 626 aa15.63■□□□□ 0.09
CBWD3-217ENST00000621474 COLGALT1Q8NBJ5 622 aa15.63■□□□□ 0.09
CBWD3-217ENST00000621474 GDPD5Q8WTR4 605 aa15.63■□□□□ 0.09
CBWD3-217ENST00000621474 SNX27Q96L92 541 aa15.63■□□□□ 0.09
CBWD3-217ENST00000621474 ZMAT2Q96NC0 199 aaKnown RBP15.63■□□□□ 0.09
CBWD3-217ENST00000621474 SAMD11Q96NU1 681 aa15.63■□□□□ 0.09
CBWD3-217ENST00000621474 CPSF3Q9UKF6 684 aaKnown RBP15.63■□□□□ 0.09
CBWD3-217ENST00000621474 H3BNC9 293 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 ZC3H11AO75152 810 aaKnown RBP eCLIP15.62■□□□□ 0.09
CBWD3-217ENST00000621474 CXCL8P10145 99 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 MATR3P43243 847 aaKnown RBP eCLIP15.62■□□□□ 0.09
CBWD3-217ENST00000621474 GLRA4Q5JXX5 417 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 SLFN12LQ6IEE8 588 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 KCNT2Q6UVM3 1135 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 STXBP4Q6ZWJ1 553 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 SYCP3Q8IZU3 236 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 KLHL23Q8NBE8 558 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 FBXO22Q8NEZ5 403 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 URGCPQ8TCY9 931 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 GPT2Q8TD30 523 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 POMGNT1Q8WZA1 660 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 CCDC34Q96HJ3 373 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 ACAP3Q96P50 834 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 GSDMAQ96QA5 445 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 CDX2Q99626 313 aaPredicted RBP15.62■□□□□ 0.09
CBWD3-217ENST00000621474 MSTO1Q9BUK6 570 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 CCDC94Q9BW85 323 aaPredicted RBP15.62■□□□□ 0.09
CBWD3-217ENST00000621474 PLVAPQ9BX97 442 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 GBP3Q9H0R5 595 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 KCTD10Q9H3F6 313 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 CNTN3Q9P232 1028 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 KANSL3Q9P2N6 904 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 CACNG4Q9UBN1 327 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 AGO2Q9UKV8 859 aaKnown RBP15.62■□□□□ 0.09
CBWD3-217ENST00000621474 RWDD3Q9Y3V2 267 aa15.62■□□□□ 0.09
CBWD3-217ENST00000621474 TTC26A0AVF1 554 aa15.61■□□□□ 0.09
CBWD3-217ENST00000621474 NT5C1B-RDH14C9J2C7 533 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms