RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 E9PMD0 336 aa26.45■■□□□ 1.82
ATXN3-253ENST00000621269 H3BQV1 296 aa26.45■■□□□ 1.82
ATXN3-253ENST00000621269 K7ERI5 159 aa26.45■■□□□ 1.82
ATXN3-253ENST00000621269 RECQL4O94761 1208 aa26.45■■□□□ 1.82
ATXN3-253ENST00000621269 THP07101 528 aa26.45■■□□□ 1.82
ATXN3-253ENST00000621269 DCAF4L1Q3SXM0 396 aa26.45■■□□□ 1.82
ATXN3-253ENST00000621269 C15orf39Q6ZRI6 1047 aa26.45■■□□□ 1.82
ATXN3-253ENST00000621269 CCDC149Q6ZUS6 474 aa26.45■■□□□ 1.82
ATXN3-253ENST00000621269 APBB1IPQ7Z5R6 666 aaPredicted RBP26.45■■□□□ 1.82
ATXN3-253ENST00000621269 UBALD2Q8IYN6 164 aa26.45■■□□□ 1.82
ATXN3-253ENST00000621269 FBXL6Q8N531 539 aa26.45■■□□□ 1.82
ATXN3-253ENST00000621269 ACSF2Q96CM8 615 aaPredicted RBP26.45■■□□□ 1.82
ATXN3-253ENST00000621269 B3GALT6Q96L58 329 aa26.45■■□□□ 1.82
ATXN3-253ENST00000621269 CCDC169A6NNP5 214 aa26.44■■□□□ 1.82
ATXN3-253ENST00000621269 GJB2P29033 226 aa26.44■■□□□ 1.82
ATXN3-253ENST00000621269 CREMQ03060 361 aa26.44■■□□□ 1.82
ATXN3-253ENST00000621269 IL17AQ16552 155 aa26.44■■□□□ 1.82
ATXN3-253ENST00000621269 ATF7IP2Q5U623 682 aa26.44■■□□□ 1.82
ATXN3-253ENST00000621269 EEF1DP3Q658K8 133 aa26.44■■□□□ 1.82
ATXN3-253ENST00000621269 GPR65Q8IYL9 337 aa26.44■■□□□ 1.82
ATXN3-253ENST00000621269 RIN2Q8WYP3 895 aaPredicted RBP26.44■■□□□ 1.82
ATXN3-253ENST00000621269 ASIC4Q96FT7 647 aa26.44■■□□□ 1.82
ATXN3-253ENST00000621269 LIMD1Q9UGP4 676 aa26.44■■□□□ 1.82
ATXN3-253ENST00000621269 GDAQ9Y2T3 454 aa26.44■■□□□ 1.82
ATXN3-253ENST00000621269 SF3B1O75533 1304 aaKnown RBP eCLIP26.43■■□□□ 1.824e-12■■■■■ 275.7
ATXN3-253ENST00000621269 CASTOR2A6NHX0 329 aa26.43■■□□□ 1.82
ATXN3-253ENST00000621269 EDN1P05305 212 aa26.43■■□□□ 1.82
ATXN3-253ENST00000621269 CDC25AP30304 524 aa26.43■■□□□ 1.82
ATXN3-253ENST00000621269 HOXD11P31277 338 aaPredicted RBP26.43■■□□□ 1.82
ATXN3-253ENST00000621269 MCM2P49736 904 aa26.43■■□□□ 1.82
ATXN3-253ENST00000621269 NT5DC1Q5TFE4 455 aa26.43■■□□□ 1.82
ATXN3-253ENST00000621269 OTOP3Q7RTS5 596 aa26.43■■□□□ 1.82
ATXN3-253ENST00000621269 PALB2Q86YC2 1186 aa26.43■■□□□ 1.82
ATXN3-253ENST00000621269 CMASQ8NFW8 434 aaPredicted RBP26.43■■□□□ 1.82
ATXN3-253ENST00000621269 CACNG4Q9UBN1 327 aa26.43■■□□□ 1.82
ATXN3-253ENST00000621269 CCDC195A0A1B0GUA6 201 aa26.42■■□□□ 1.82
ATXN3-253ENST00000621269 PTGESO14684 152 aa26.42■■□□□ 1.82
ATXN3-253ENST00000621269 HIP1RO75146 1068 aa26.42■■□□□ 1.82
ATXN3-253ENST00000621269 C1RP00736 705 aa26.42■■□□□ 1.82
ATXN3-253ENST00000621269 PEX3P56589 373 aa26.42■■□□□ 1.82
ATXN3-253ENST00000621269 ZRSR1Q15695 479 aaKnown RBP26.42■■□□□ 1.82
ATXN3-253ENST00000621269 FEZF2Q8TBJ5 459 aa26.42■■□□□ 1.82
ATXN3-253ENST00000621269 HDAC7Q8WUI4 952 aa26.42■■□□□ 1.82
ATXN3-253ENST00000621269 DRC1Q96MC2 740 aa26.42■■□□□ 1.82
ATXN3-253ENST00000621269 PAAF1Q9BRP4 392 aa26.42■■□□□ 1.82
ATXN3-253ENST00000621269 FNIP2Q9P278 1114 aa26.42■■□□□ 1.82
ATXN3-253ENST00000621269 ASGR2P07307 311 aa26.41■■□□□ 1.82
ATXN3-253ENST00000621269 SPATA31D3P0C874 917 aa26.41■■□□□ 1.82
ATXN3-253ENST00000621269 MYBP10242 640 aa26.41■■□□□ 1.82
ATXN3-253ENST00000621269 NPTX2P47972 431 aa26.41■■□□□ 1.82
ATXN3-253ENST00000621269 DMP1Q13316 513 aaPredicted RBP26.41■■□□□ 1.82
ATXN3-253ENST00000621269 CYP26C1Q6V0L0 522 aa26.41■■□□□ 1.82
ATXN3-253ENST00000621269 SPATA31D4Q6ZUB0 917 aa26.41■■□□□ 1.82
ATXN3-253ENST00000621269 GLYCTKQ8IVS8 523 aa26.41■■□□□ 1.82
ATXN3-253ENST00000621269 HASPINQ8TF76 798 aa26.41■■□□□ 1.82
ATXN3-253ENST00000621269 PLEKHA4Q9H4M7 779 aa26.41■■□□□ 1.82
ATXN3-253ENST00000621269 PHLPP2Q6ZVD8 1323 aa26.4■■□□□ 1.82
ATXN3-253ENST00000621269 TECTAO75443 2155 aa26.4■■□□□ 1.82
ATXN3-253ENST00000621269 CD2BP2O95400 341 aaKnown RBP26.4■■□□□ 1.82
ATXN3-253ENST00000621269 BRD1O95696 1058 aa26.4■■□□□ 1.82
ATXN3-253ENST00000621269 ATP2C1P98194 919 aaPredicted RBP26.4■■□□□ 1.82
ATXN3-253ENST00000621269 RINT1Q6NUQ1 792 aa26.4■■□□□ 1.82
ATXN3-253ENST00000621269 PRRX2Q99811 253 aa26.4■■□□□ 1.82
ATXN3-253ENST00000621269 MMTAG2Q9BU76 263 aaKnown RBP26.4■■□□□ 1.82
ATXN3-253ENST00000621269 RUSC1Q9BVN2 902 aa26.4■■□□□ 1.82
ATXN3-253ENST00000621269 TMEM134Q9H6X4 195 aa26.4■■□□□ 1.82
ATXN3-253ENST00000621269 KMT5AQ9NQR1 393 aa26.4■■□□□ 1.82
ATXN3-253ENST00000621269 SMC3Q9UQE7 1217 aa26.4■■□□□ 1.82
ATXN3-253ENST00000621269 TNFSF13BQ9Y275 285 aa26.4■■□□□ 1.82
ATXN3-253ENST00000621269 TGM5O43548 720 aa26.39■■□□□ 1.82
ATXN3-253ENST00000621269 KIF4AO95239 1232 aa26.39■■□□□ 1.82
ATXN3-253ENST00000621269 FAM171A1Q5VUB5 890 aa26.39■■□□□ 1.82
ATXN3-253ENST00000621269 CEP57Q86XR8 500 aa26.39■■□□□ 1.82
ATXN3-253ENST00000621269 TTPALQ9BTX7 342 aa26.39■■□□□ 1.82
ATXN3-253ENST00000621269 TIPINQ9BVW5 301 aa26.39■■□□□ 1.82
ATXN3-253ENST00000621269 CXCL16Q9H2A7 254 aa26.39■■□□□ 1.82
ATXN3-253ENST00000621269 C17orf75Q9HAS0 396 aa26.39■■□□□ 1.82
ATXN3-253ENST00000621269 RBM19Q9Y4C8 960 aaKnown RBP26.39■■□□□ 1.82
ATXN3-253ENST00000621269 VWA3AA6NCI4 1184 aa26.38■■□□□ 1.81
ATXN3-253ENST00000621269 RFPL2O75678 378 aa26.38■■□□□ 1.81
ATXN3-253ENST00000621269 RPL17P18621 184 aaKnown RBP26.38■■□□□ 1.81
ATXN3-253ENST00000621269 YARSP54577 528 aaKnown RBP26.38■■□□□ 1.81
ATXN3-253ENST00000621269 NHLH1Q02575 133 aa26.38■■□□□ 1.81
ATXN3-253ENST00000621269 ELAVL2Q12926 359 aaKnown RBP26.38■■□□□ 1.81
ATXN3-253ENST00000621269 NAB2Q15742 525 aa26.38■■□□□ 1.81
ATXN3-253ENST00000621269 RTP2Q5QGT7 225 aa26.38■■□□□ 1.81
ATXN3-253ENST00000621269 PRSS55Q6UWB4 352 aaPredicted RBP26.38■■□□□ 1.81
ATXN3-253ENST00000621269 C1orf186Q6ZWK4 172 aa26.38■■□□□ 1.81
ATXN3-253ENST00000621269 KCNK18Q7Z418 384 aa26.38■■□□□ 1.81
ATXN3-253ENST00000621269 DAW1Q8N136 415 aa26.38■■□□□ 1.81
ATXN3-253ENST00000621269 SMG7Q92540 1137 aaKnown RBP26.38■■□□□ 1.81
ATXN3-253ENST00000621269 STAMQ92783 540 aa26.38■■□□□ 1.81
ATXN3-253ENST00000621269 CDK5RAP3Q96JB5 506 aa26.38■■□□□ 1.81
ATXN3-253ENST00000621269 MRPL4Q9BYD3 311 aaKnown RBP26.38■■□□□ 1.81
ATXN3-253ENST00000621269 RHOBTB2Q9BYZ6 727 aa26.38■■□□□ 1.81
ATXN3-253ENST00000621269 NT5C3AQ9H0P0 336 aa26.38■■□□□ 1.81
ATXN3-253ENST00000621269 PIDD1Q9HB75 910 aa26.38■■□□□ 1.81
ATXN3-253ENST00000621269 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.38■■□□□ 1.81
ATXN3-253ENST00000621269 IER5LQ5T953 404 aa26.37■■□□□ 1.81
ATXN3-253ENST00000621269 KCTD17Q8N5Z5 321 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms