RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 RPUSD2Q8IZ73 545 aaKnown RBP10.72□□□□□ -0.69
VTA1-205ENST00000620996 LMO3Q8TAP4 145 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 CTNNBL1Q8WYA6 563 aaPredicted RBP10.72□□□□□ -0.69
VTA1-205ENST00000620996 TAF4BQ92750 862 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 TATDN2Q93075 761 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 PARD6BQ9BYG5 372 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 SNX12Q9UMY4 172 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 HYOU1Q9Y4L1 999 aa10.72□□□□□ -0.69
VTA1-205ENST00000620996 ANO9A1A5B4 782 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 P4HA2O15460 535 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 LGALS2P05162 132 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 MRPS25P82663 173 aaKnown RBP10.71□□□□□ -0.69
VTA1-205ENST00000620996 LAMC2Q13753 1193 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 TAF1CQ15572 869 aaPredicted RBP10.71□□□□□ -0.69
VTA1-205ENST00000620996 PRAMEF19Q5SWL8 479 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 GPR161Q8N6U8 529 aaKnown RBP10.71□□□□□ -0.69
VTA1-205ENST00000620996 RABGGTAQ92696 567 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 MRPL4Q9BYD3 311 aaKnown RBP10.71□□□□□ -0.69
VTA1-205ENST00000620996 GPR88Q9GZN0 384 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 GEMIN8Q9NWZ8 242 aaKnown RBP10.71□□□□□ -0.69
VTA1-205ENST00000620996 PCNTO95613 3336 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 TMEM110-MUSTN1A8MSY1 372 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 MAPK13O15264 365 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 SGPL1O95470 568 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 INSRRP14616 1297 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 ABCD1P33897 745 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 GALCP54803 685 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 ARHGAP1Q07960 439 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 PAPD7Q5XG87 772 aaKnown RBP10.71□□□□□ -0.69
VTA1-205ENST00000620996 SPOPLQ6IQ16 392 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 PLPPR4Q7Z2D5 763 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 RNF10Q8N5U6 811 aaKnown RBP10.71□□□□□ -0.69
VTA1-205ENST00000620996 OR6J1Q8NGC5 347 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 MFSD14AQ96MC6 490 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 OSBPL9Q96SU4 736 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 AGPAT1Q99943 283 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 TAS2R14Q9NYV8 317 aa10.71□□□□□ -0.69
VTA1-205ENST00000620996 CHORDC1Q9UHD1 332 aaPredicted RBP10.71□□□□□ -0.69
VTA1-205ENST00000620996 TULP2O00295 520 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 STRNO43815 780 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 HBP1O60381 514 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 RFX1P22670 979 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 TNFSF9P41273 254 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 PAFAH1B1P43034 410 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 WNT7BP56706 349 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 TFDP1Q14186 410 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 MXD4Q14582 209 aaPredicted RBP10.71□□□□□ -0.7
VTA1-205ENST00000620996 C10orf76Q5T2E6 689 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 CST9Q5W186 159 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 RSRC2Q7L4I2 434 aaKnown RBP10.71□□□□□ -0.7
VTA1-205ENST00000620996 DAAM2Q86T65 1068 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 PALB2Q86YC2 1186 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 TMC2Q8TDI7 906 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 MS4A14Q96JA4 679 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 HAPLN2Q9GZV7 340 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 KIAA1586Q9HCI6 787 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 VTA1Q9NP79 307 aa10.71□□□□□ -0.7
VTA1-205ENST00000620996 LGR5O75473 907 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 IFI16Q16666 785 aaKnown RBP10.7□□□□□ -0.7
VTA1-205ENST00000620996 DNAJC21Q5F1R6 531 aaKnown RBP10.7□□□□□ -0.7
VTA1-205ENST00000620996 TAPT1Q6NXT6 567 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 SLC47A2Q86VL8 602 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 FMNL3Q8IVF7 1028 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 KREMEN1Q96MU8 473 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 CEP89Q96ST8 783 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 JPH2Q9BR39 696 aaPredicted RBP10.7□□□□□ -0.7
VTA1-205ENST00000620996 PLEKHA4Q9H4M7 779 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 B4GALT5O43286 388 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 HLA-DRAP01903 254 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 VTNP04004 478 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 ZBTB48P10074 688 aaPredicted RBP10.7□□□□□ -0.7
VTA1-205ENST00000620996 SSTR3P32745 418 aaPredicted RBP10.7□□□□□ -0.7
VTA1-205ENST00000620996 PDE6CP51160 858 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 EFNA5P52803 228 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 MKRN4PQ13434 485 aaPredicted RBP10.7□□□□□ -0.7
VTA1-205ENST00000620996 PRPF4BQ13523 1007 aaKnown RBP10.7□□□□□ -0.7
VTA1-205ENST00000620996 ZNF568Q3ZCX4 644 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 MAML3Q96JK9 1138 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 DIS3Q9Y2L1 958 aaKnown RBP10.7□□□□□ -0.7
VTA1-205ENST00000620996 ARID2Q68CP9 1835 aa10.7□□□□□ -0.7
VTA1-205ENST00000620996 GRID2IPA4D2P6 1211 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 PDE2AO00408 941 aaPredicted RBP10.69□□□□□ -0.7
VTA1-205ENST00000620996 KCNK3O14649 394 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 DYNC1LI2O43237 492 aaPredicted RBP10.69□□□□□ -0.7
VTA1-205ENST00000620996 ZMYND10O75800 440 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 SNAI1O95863 264 aaPredicted RBP10.69□□□□□ -0.7
VTA1-205ENST00000620996 LDHAP00338 332 aaKnown RBP10.69□□□□□ -0.7
VTA1-205ENST00000620996 CYP2B6P20813 491 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 TFAMQ00059 246 aaKnown RBP10.69□□□□□ -0.7
VTA1-205ENST00000620996 NPLOC4Q8TAT6 608 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 NLRP7Q8WX94 980 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 ZNF516Q92618 1163 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 LENG1Q96BZ8 264 aaPredicted RBP10.69□□□□□ -0.7
VTA1-205ENST00000620996 FBXL18Q96ME1 805 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 TINF2Q9BSI4 451 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 OSGEPQ9NPF4 335 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 CTTNBP2NLQ9P2B4 639 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 ZBTB42B2RXF5 422 aa10.69□□□□□ -0.7
VTA1-205ENST00000620996 ATMINO43313 823 aaPredicted RBP10.69□□□□□ -0.7
VTA1-205ENST00000620996 TCP1P17987 556 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms