RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 DDX23Q9BUQ8 820 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 KCTD10Q9H3F6 313 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 BCAS3Q9H6U6 928 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 SHOX2O60902 331 aaPredicted RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 SEC24CP53992 1094 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 PDE1BQ01064 536 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 PLCB4Q15147 1175 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 ARSHQ5FYA8 562 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 NBPF12Q5TAG4 269 aaPredicted RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 ZFPM1Q8IX07 1006 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 EXOC8Q8IYI6 725 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 ARFGAP2Q8N6H7 521 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 GPATCH11Q8N954 259 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 CDC26Q8NHZ8 85 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 C11orf70Q9BRQ4 267 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 UBN1Q9NPG3 1134 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 GDF3Q9NR23 364 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 AMACRQ9UHK6 382 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 PCDHGC5Q9Y5F6 944 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 RBAK-RBAKDNI3L0D1 243 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 AKAP3O75969 853 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 NR3C1P04150 777 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 SNHG28P0DPA3 235 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 PSMC5P62195 406 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 KCNA1Q09470 495 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 MYO1EQ12965 1108 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 PAN2Q504Q3 1202 aaKnown RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 WHAMMQ8TF30 809 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 INPP4AQ96PE3 977 aaPredicted RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 SH3GL2Q99962 352 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 GANQ9H2C0 597 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 IKZF4Q9H2S9 585 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 ZNF302Q9NR11 478 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 AIPL1Q9NZN9 384 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 NAGPAQ9UK23 515 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 PIN4Q9Y237 131 aaKnown RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 CCDC78A2IDD5 438 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 PGRMC1O00264 195 aaKnown RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 SART1O43290 800 aaKnown RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 PON1P27169 355 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 ADORA2BP29275 332 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 QARSP47897 775 aaKnown RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 GIT2Q14161 759 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 SETDB1Q15047 1291 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 ZKSCAN8Q15776 578 aaPredicted RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 RSBN1LQ6PCB5 846 aaPredicted RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 PPP4R3CPQ6ZMV5 832 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 SYCE1Q8N0S2 351 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 CERS5Q8N5B7 392 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 ZNF280CQ8ND82 737 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 TEX13BQ9BXU2 312 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 STMN4Q9H169 189 aaPredicted RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 TAF1DQ9H5J8 278 aaPredicted RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 LMCD1Q9NZU5 365 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 PRG3Q9Y2Y8 225 aaPredicted RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 NOC2LQ9Y3T9 749 aaKnown RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 RGL2O15211 777 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 LSP1P33241 339 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 CLK2P49760 499 aaKnown RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 GTF2A1P52655 376 aaPredicted RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 SLC12A3P55017 1021 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 ATP11AP98196 1134 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 CXCL9Q07325 125 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 EDRF1Q3B7T1 1238 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 C1orf228Q6PIY5 440 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 CYP2W1Q8TAV3 490 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 SLC16A10Q8TF71 515 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 ARHGEF2Q92974 986 aaKnown RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 IRAK4Q9NWZ3 460 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 PRR12Q9ULL5 1215 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 TTC7AQ9ULT0 858 aaPredicted RBP8.83□□□□□ -1
PTPDC1-204ENST00000620992 CAPN7Q9Y6W3 813 aa8.83□□□□□ -1
PTPDC1-204ENST00000620992 NEMP1O14524 444 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 PDGFRBP09619 1106 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 STAT5BP51692 787 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 USP11P51784 963 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 ERVK-9P63128 1117 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 CEP55Q53EZ4 464 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 FBXW10Q5XX13 1052 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 B4GALNT4Q76KP1 1039 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 AFG1LQ8WV93 481 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 EXT2Q93063 718 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 FBXO40Q9UH90 709 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 CPA4Q9UI42 421 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 PCDHA2Q9Y5H9 948 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 GRIN2DO15399 1336 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 DNAJC13O75165 2243 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 WDR91A4D1P6 747 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 RGS16O15492 202 aaPredicted RBP8.82□□□□□ -1
PTPDC1-204ENST00000620992 NR3C2P08235 984 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 ITGA4P13612 1032 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 CPB1P15086 417 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 WDR72Q3MJ13 1102 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 BBS9Q3SYG4 887 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 ACCSLQ4AC99 568 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 C15orf52Q6ZUT6 534 aaKnown RBP8.82□□□□□ -1
PTPDC1-204ENST00000620992 RAPH1Q70E73 1250 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 IQCKQ8N0W5 287 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 ATP6V1G3Q96LB4 118 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms