RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CERKLQ49MI3 558 aaPredicted RBP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 KCNV2Q8TDN2 545 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 UPF1Q92900 1129 aaKnown RBP eCLIP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 CDHR1Q96JP9 859 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 SFMBT1Q9UHJ3 866 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 IGSF1Q8N6C5 1336 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 CCNE1P24864 410 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 EIF4A3P38919 411 aaKnown RBP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 PSMC6P62333 389 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 DCTN2Q13561 401 aaKnown RBP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 ARL6IP4Q66PJ3 421 aaKnown RBP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 TRIM72Q6ZMU5 477 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 OTULINQ96BN8 352 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 PRRG3Q9BZD7 231 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 NRBP1Q9UHY1 535 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 PDZK1P1A8MUH7 402 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 MYL3P08590 195 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 TIMM10P62072 90 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 ZCWPW2Q504Y3 356 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 TSPAN17Q96FV3 270 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 KIAA1586Q9HCI6 787 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 MAGI3Q5TCQ9 1506 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 ZNF804BA4D1E1 1349 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 MLH3Q9UHC1 1453 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 ZNF197O14709 1029 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 GUCA1CO95843 209 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 SLFN12LQ6IEE8 588 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 MFN1Q8IWA4 741 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 CLEC4FQ8N1N0 589 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 RAB42Q8N4Z0 105 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 PLEKHA8Q96JA3 519 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 TSSK1BQ9BXA7 367 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 ROPN1BQ9BZX4 212 aaPredicted RBP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 ROPN1Q9HAT0 212 aaPredicted RBP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 FIS1Q9Y3D6 152 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 ADCY9O60503 1353 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 TNPO2O14787 897 aaKnown RBP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 USP17L8P0C7I0 530 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 HMOX2P30519 316 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 TALDO1P37837 337 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 HUNKP57058 714 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 BNC1Q01954 994 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 GCKRQ14397 625 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 XKR9Q5GH70 373 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 CCDC149Q6ZUS6 474 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 TMC4Q7Z404 712 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 MICU2Q8IYU8 434 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 ZHX2Q9Y6X8 837 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 SAMD9LQ8IVG5 1584 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 KRT20P35900 424 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 PKN2Q16513 984 aaKnown RBP7.56□□□□□ -1.2
COLCA1-205ENST00000620864 UGP2Q16851 508 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 POTEEQ6S8J3 1075 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 RIN3Q8TB24 985 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 MCRS1Q96EZ8 462 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 RBBP8Q99708 897 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 ASNSD1Q9NWL6 643 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 VPS54Q9P1Q0 977 aa7.56□□□□□ -1.2
COLCA1-205ENST00000620864 DLATP10515 647 aaKnown RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 FCGR1AP12314 374 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 POLGP54098 1239 aaPredicted RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 USP14P54578 494 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 SNAP25P60880 206 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 SMIM5Q71RC9 77 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 P3H2Q8IVL5 708 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 FAM45AQ8TCE6 357 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 XAGE2Q96GT9 111 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 CALN1Q9BXU9 219 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 CARD9Q9H257 536 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ARHGEF3Q9NR81 526 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 KLHL20Q9Y2M5 609 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 MAP3K4Q9Y6R4 1608 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 BTDP43251 543 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 CORO7P57737 925 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 SLC15A2Q16348 729 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 RNF219Q5W0B1 726 aaPredicted RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 CDKL3Q8IVW4 592 aaPredicted RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 FAM9CQ8IZT9 166 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 FANCBQ8NB91 859 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 MTERF3Q96E29 417 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 OSBPL5Q9H0X9 879 aaPredicted RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 NRDE2Q9H7Z3 1164 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ZFYVE28Q9HCC9 887 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 RHBDL2Q9NX52 303 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ENOPH1Q9UHY7 261 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 DNAJC12Q9UKB3 198 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 SHANK2Q9UPX8 1470 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ARHGEF12Q9NZN5 1544 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 POTEFA5A3E0 1075 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 CFAP69A5D8W1 941 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 DNALI1O14645 258 aaPredicted RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 LDHAP00338 332 aaKnown RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ALBP02768 609 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ABCB1P08183 1280 aaPredicted RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 TECP42680 631 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 LBX1P52954 281 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 KIAA1755Q5JYT7 1200 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 TRPM8Q7Z2W7 1104 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ARHGAP22Q7Z5H3 698 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms