RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 ZC3H4Q9UPT8 1303 aaKnown RBP21.4■■□□□ 1.02
FGFR1-241ENST00000619564 TTC26A0AVF1 554 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 TBX3O15119 743 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 TMEM132DQ14C87 1099 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 SMIM5Q71RC9 77 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 ASAP3Q8TDY4 903 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 INTUQ9ULD6 942 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 SNX9Q9Y5X1 595 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 FAM187AA6NFU0 413 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 HNRNPCL2B2RXH8 293 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 HNRNPCL1O60812 293 aaKnown RBP21.4■■□□□ 1.02
FGFR1-241ENST00000619564 HDLBPQ00341 1268 aaKnown RBP21.4■■□□□ 1.02
FGFR1-241ENST00000619564 KCNA1Q09470 495 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 SHC4Q6S5L8 630 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 RAB42Q8N4Z0 105 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 ATP11CQ8NB49 1132 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 TMEM60Q9H2L4 133 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 ITM2BQ9Y287 266 aa21.4■■□□□ 1.02
FGFR1-241ENST00000619564 E2F6O75461 281 aa21.39■■□□□ 1.02
FGFR1-241ENST00000619564 SKIP12755 728 aa21.39■■□□□ 1.02
FGFR1-241ENST00000619564 FBXW4P57775 412 aa21.39■■□□□ 1.02
FGFR1-241ENST00000619564 TSGA10IPQ3SY00 556 aa21.39■■□□□ 1.02
FGFR1-241ENST00000619564 THEMIS2Q5TEJ8 643 aa21.39■■□□□ 1.02
FGFR1-241ENST00000619564 ARHGEF40Q8TER5 1519 aa21.39■■□□□ 1.02
FGFR1-241ENST00000619564 CYP26A1O43174 497 aa21.39■■□□□ 1.02
FGFR1-241ENST00000619564 CYP2B6P20813 491 aa21.39■■□□□ 1.02
FGFR1-241ENST00000619564 TBCCQ15814 346 aa21.39■■□□□ 1.02
FGFR1-241ENST00000619564 ZBED8Q8IZ13 594 aa21.39■■□□□ 1.02
FGFR1-241ENST00000619564 CLTCL1P53675 1640 aa21.39■■□□□ 1.01
FGFR1-241ENST00000619564 TAF11Q15544 211 aa21.39■■□□□ 1.01
FGFR1-241ENST00000619564 TEX12Q9BXU0 123 aa21.39■■□□□ 1.01
FGFR1-241ENST00000619564 RRP15Q9Y3B9 282 aaKnown RBP21.39■■□□□ 1.01
FGFR1-241ENST00000619564 NPHP3-ACAD11A0A0J9YXS1 232 aa21.39■■□□□ 1.01
FGFR1-241ENST00000619564 ZNF197O14709 1029 aa21.39■■□□□ 1.01
FGFR1-241ENST00000619564 RTN2O75298 545 aa21.39■■□□□ 1.01
FGFR1-241ENST00000619564 RFC5P40937 340 aa21.39■■□□□ 1.01
FGFR1-241ENST00000619564 SSTR3P32745 418 aaPredicted RBP21.39■■□□□ 1.01
FGFR1-241ENST00000619564 GUCY1A2P33402 732 aa21.39■■□□□ 1.01
FGFR1-241ENST00000619564 SLC1A1P43005 524 aa21.39■■□□□ 1.01
FGFR1-241ENST00000619564 NFRKBQ6P4R8 1299 aa21.39■■□□□ 1.01
FGFR1-241ENST00000619564 C18orf8Q96DM3 657 aa21.39■■□□□ 1.01
FGFR1-241ENST00000619564 MRPL40Q9NQ50 206 aaKnown RBP21.39■■□□□ 1.01
FGFR1-241ENST00000619564 KCND2Q9NZV8 630 aa21.39■■□□□ 1.01
FGFR1-241ENST00000619564 PRR12Q9ULL5 1215 aa21.39■■□□□ 1.01
FGFR1-241ENST00000619564 PSMD14O00487 310 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 SLC26A4O43511 780 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 CCDC137Q6PK04 289 aaKnown RBP21.38■■□□□ 1.01
FGFR1-241ENST00000619564 CCSER1Q9C0I3 900 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 NCK2O43639 380 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 ST8SIA6P61647 398 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 LINC00116Q8NCU8 138 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.38■■□□□ 1.01
FGFR1-241ENST00000619564 ADGRB3O60242 1522 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 GRAMD1BQ3KR37 738 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 SPATA31A1Q5TZJ5 1347 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 PIP4K2CQ8TBX8 421 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 THOC1Q96FV9 657 aaKnown RBP21.38■■□□□ 1.01
FGFR1-241ENST00000619564 DCUN1D1Q96GG9 259 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 BTBD6Q96KE9 485 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 RPS6KA5O75582 802 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 CETPP11597 493 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 SNX17Q15036 470 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 ANKRD40Q6AI12 368 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 STYK1Q6J9G0 422 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 C16orf86Q6ZW13 317 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 SLC7A5P2Q9GIP4 190 aa21.38■■□□□ 1.01
FGFR1-241ENST00000619564 EMC2Q15006 297 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 E2F5Q15329 346 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 FAM47EQ6ZV65 393 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 DDX53Q86TM3 631 aaKnown RBP21.37■■□□□ 1.01
FGFR1-241ENST00000619564 DDX47Q9H0S4 455 aaKnown RBP21.37■■□□□ 1.01
FGFR1-241ENST00000619564 ANLNQ9NQW6 1124 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 WDR35Q9P2L0 1181 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 PCDHB8Q9UN66 801 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 SCP2P22307 547 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 CENPKQ9BS16 269 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 PHF20Q9BVI0 1012 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 EHD2Q9NZN4 543 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 RPS12P25398 132 aaKnown RBP21.37■■□□□ 1.01
FGFR1-241ENST00000619564 HIBCHQ6NVY1 386 aaPredicted RBP21.37■■□□□ 1.01
FGFR1-241ENST00000619564 ZC3H18Q86VM9 953 aaKnown RBP21.37■■□□□ 1.01
FGFR1-241ENST00000619564 TRIM4Q9C037 500 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 SLC38A7Q9NVC3 462 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 CD4P01730 458 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 KITP10721 976 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 ACOT2P49753 483 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 GMPSP49915 693 aaPredicted RBP21.37■■□□□ 1.01
FGFR1-241ENST00000619564 C1orf167Q5SNV9 1468 aa21.37■■□□□ 1.01
FGFR1-241ENST00000619564 CCL15-CCL14A0A0B4J2E2 113 aa21.36■■□□□ 1.01
FGFR1-241ENST00000619564 CCDC195A0A1B0GUA6 201 aa21.36■■□□□ 1.01
FGFR1-241ENST00000619564 TEX33O43247 280 aa21.36■■□□□ 1.01
FGFR1-241ENST00000619564 CCL15Q16663 113 aa21.36■■□□□ 1.01
FGFR1-241ENST00000619564 MED15Q96RN5 788 aa21.36■■□□□ 1.01
FGFR1-241ENST00000619564 TRIM9Q9C026 710 aa21.36■■□□□ 1.01
FGFR1-241ENST00000619564 FBXO2Q9UK22 296 aaPredicted RBP21.36■■□□□ 1.01
FGFR1-241ENST00000619564 GYG2O15488 501 aa21.36■■□□□ 1.01
FGFR1-241ENST00000619564 SPAG7O75391 227 aa21.36■■□□□ 1.01
FGFR1-241ENST00000619564 SGSM1Q2NKQ1 1148 aa21.36■■□□□ 1.01
FGFR1-241ENST00000619564 IZUMO3Q5VZ72 239 aa21.36■■□□□ 1.01
FGFR1-241ENST00000619564 GPRC5AQ8NFJ5 357 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms