RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 STK33Q9BYT3 514 aa13.75□□□□□ -0.21
TNFAIP3-209ENST00000619035 TMEM8AQ9HCN3 771 aa13.75□□□□□ -0.21
TNFAIP3-209ENST00000619035 PDE11AQ9HCR9 933 aa13.75□□□□□ -0.21
TNFAIP3-209ENST00000619035 ZNF446Q9NWS9 450 aa13.75□□□□□ -0.21
TNFAIP3-209ENST00000619035 GNEQ9Y223 722 aaKnown RBP13.75□□□□□ -0.21
TNFAIP3-209ENST00000619035 PMM2O15305 246 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 B4GALT5O43286 388 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 AOC2O75106 756 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 H2AFXP16104 143 aaPredicted RBP13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 TMOD1P28289 359 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 SOX5P35711 763 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 CLCN6P51797 869 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 WNT7BP56706 349 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 AMPD2Q01433 879 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 POU5F1BQ06416 359 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 MTHFD1LQ6UB35 978 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 CRELD2Q6UXH1 353 aaPredicted RBP13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 RSRC2Q7L4I2 434 aaKnown RBP13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 ZNF571Q7Z3V5 609 aaPredicted RBP13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 CDR2LQ86X02 465 aaPredicted RBP13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 TAS1R2Q8TE23 839 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 SEMA4DQ92854 862 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 MINDY3Q9H8M7 445 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 SETD4Q9NVD3 440 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 MYO1AQ9UBC5 1043 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 SALL4Q9UJQ4 1053 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 CAPN6Q9Y6Q1 641 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 A0A087WZ62 844 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 A0A087X0T9 212 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 FAM170AA1A519 330 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 A6NJR5 290 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 EVI5O60447 810 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 TOM1L1O75674 476 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 MOCS3O95396 460 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 LCA5LO95447 670 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 LDHAP00338 332 aaKnown RBP13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 FAM228BP0C875 321 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 PSMC4P43686 418 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 CBX1P83916 185 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 PRPF4BQ13523 1007 aaKnown RBP13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 SLC18A3Q16572 532 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 SV2AQ7L0J3 742 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 SRGAP1Q7Z6B7 1085 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 PPM1KQ8N3J5 372 aa13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 ACO2Q99798 780 aaKnown RBP13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 FDXACB1Q9BRP7 624 aaPredicted RBP13.74□□□□□ -0.21
TNFAIP3-209ENST00000619035 EVPLQ92817 2033 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 CLSTN1O94985 981 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 TBC1D8O95759 1140 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 FERP16591 822 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 TNFSF9P41273 254 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 PHKA2P46019 1235 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 PTENP60484 403 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 BEX3Q00994 111 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 MBTD1Q05BQ5 628 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 PSMD6Q15008 389 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 KIAA0753Q2KHM9 967 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 DEFB115Q30KQ5 88 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 FBXL13Q8NEE6 735 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 NLRP7Q8WX94 980 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 CAPZA3Q96KX2 299 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 CFHR5Q9BXR6 569 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 NFKBIZQ9BYH8 718 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 GPR88Q9GZN0 384 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 AP5M1Q9H0R1 490 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 CREBZFQ9NS37 354 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 BZW2Q9Y6E2 419 aaKnown RBP13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 RFX1P22670 979 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 GTF2H1P32780 548 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 USP8P40818 1118 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 BIRC3Q13489 604 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 MARCH8Q5T0T0 291 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 ATF7IP2Q5U623 682 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 GOLGA1Q92805 767 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 KAT5Q92993 513 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 SECISBP2LQ93073 1101 aaKnown RBP13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 PI4K2AQ9BTU6 479 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 TSGA10Q9BZW7 698 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 IFT122Q9HBG6 1241 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 RAB20Q9NX57 234 aa13.73□□□□□ -0.21
TNFAIP3-209ENST00000619035 CENPFP49454 3210 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 ZSWIM8A7E2V4 1837 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 FOXN3O00409 490 aaPredicted RBP13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 ACKR2O00590 384 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 ZNF185O15231 689 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 BUB1O43683 1085 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 SEC31AO94979 1220 aaKnown RBP13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 MYL3P08590 195 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 IQCF3P0C7M6 154 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 PTPRJQ12913 1337 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 ZNF568Q3ZCX4 644 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 ZNF662Q6ZS27 426 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 TRAPPC11Q7Z392 1133 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 VPS36Q86VN1 386 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 FMNL3Q8IVF7 1028 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 LINC01465Q8N7H1 131 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 LMBR1Q8WVP7 490 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 ZNF516Q92618 1163 aa13.72□□□□□ -0.21
TNFAIP3-209ENST00000619035 FAM49AQ9H0Q0 323 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms