RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	CMTM3	Q96MX0	182 aa		4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	TSEN34	Q9BSV6	310 aa	Known RBP	4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	PHF20	Q9BVI0	1012 aa		4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	FAM129A	Q9BZQ8	928 aa		4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	MTMR12	Q9C0I1	747 aa		4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	PANK3	Q9H999	370 aa		4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	RXFP3	Q9NSD7	469 aa		4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	TRMT13	Q9NUP7	481 aa	Known RBP	4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	DACT1	Q9NYF0	836 aa		4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	FNIP2	Q9P278	1114 aa		4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	FKBPL	Q9UIM3	349 aa		4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	FAM208A	Q9UK61	1670 aa	Known RBP	4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836	LTN1	O94822	1766 aa		4.4	□□□□□ -1.7
UBE2D3-233	ENST00000618836		A0A0B4J269	797 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	MAGEB6P1	A0A0J9YX57	407 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	GOLGA6L10	A6NI86	522 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PRR5-ARHGAP8	B1AHC4	643 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	EBAG9	O00559	213 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TACC1	O75410	805 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	RPS6KA5	O75582	802 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CAVIN2	O95810	425 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ASGR1	P07306	291 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	GLI1	P08151	1106 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	LTA4H	P09960	611 aa	Known RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CYP2A6	P11509	494 aa	Predicted RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SFPQ	P23246	707 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CPA2	P48052	419 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	BYSL	Q13895	437 aa	Known RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	MXD4	Q14582	209 aa	Predicted RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PABPC1L	Q4VXU2	614 aa	Known RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	WDR73	Q6P4I2	378 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	B3GNT6	Q6ZMB0	384 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	USP50	Q70EL3	339 aa	Predicted RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	KRT74	Q7RTS7	529 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PLEKHM2	Q8IWE5	1019 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	KIAA0319L	Q8IZA0	1049 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	FAM9C	Q8IZT9	166 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SYNPO	Q8N3V7	929 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PLPP7	Q8NBV4	271 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SHCBP1	Q8NEM2	672 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	OR6P1	Q8NGX9	317 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ANKS1A	Q92625	1134 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CNKSR1	Q969H4	720 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SEC16B	Q96JE7	1060 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	EGLN2	Q96KS0	407 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ZDHHC15	Q96MV8	337 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TTC25	Q96NG3	672 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ALS2CR12	Q96Q35	445 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CCT7	Q99832	543 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TREX2	Q9BQ50	279 aa	Predicted RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	C12orf10	Q9HB07	376 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	DDX4	Q9NQI0	724 aa	Known RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	MBD2	Q9UBB5	411 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	EXOC6B	Q9Y2D4	811 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CRYL1	Q9Y2S2	319 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	C15orf41	Q9Y2V0	281 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PCDHB3	Q9Y5E6	796 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SESN1	Q9Y6P5	492 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ROCK2	O75116	1388 aa	Known RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CCDC171	Q6TFL3	1326 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	hCG_1642624	A0A1W2PR95	340 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	EIF3CL	B5ME19	914 aa	Known RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TRDMT1	O14717	391 aa	Known RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	WDR46	O15213	610 aa	Known RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ST8SIA5	O15466	376 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	BRINP1	O60477	761 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	HSPA4L	O95757	839 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	APBA3	O96018	575 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ALDH2	P05091	517 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	AKR1B1	P15121	316 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ARF4	P18085	180 aa	Predicted RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	MCM4	P33991	863 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CCT6A	P40227	531 aa	Known RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CBX5	P45973	191 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	GSK3A	P49840	483 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CORO7	P57737	925 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	RAB15	P59190	212 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	RPP38	P78345	283 aa	Known RBP	4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	NIPAL4	Q0D2K0	466 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	RAB3GAP1	Q15042	981 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TCEA2	Q15560	299 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	ANO4	Q32M45	955 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	LINC01559	Q495D7	138 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CCDC38	Q502W7	563 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	FAM171B	Q6P995	826 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CCDC62	Q6P9F0	684 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TXNDC11	Q6PKC3	985 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	LYPD8	Q6UX82	237 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	TPTE2	Q6XPS3	522 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	NECAB2	Q7Z6G3	386 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	FAM124A	Q86V42	546 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PASD1	Q8IV76	773 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	CCDC170	Q8IYT3	715 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	PHTF2	Q8N3S3	785 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	SPATA5	Q8NB90	893 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	FBXO18	Q8NFZ0	1043 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	LILRB4	Q8NHJ6	448 aa		4.4	□□□□□ -1.71
UBE2D3-233	ENST00000618836	FBXO27	Q8NI29	283 aa		4.4	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms