RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 SERHLQ9NQF3 203 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 PLEKHG2Q9H7P9 1386 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 FAM162AQ96A26 154 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 TRAP1Q12931 704 aaKnown RBP15.81■□□□□ 0.12
COL5A1-208ENST00000618395 ATP13A5Q4VNC0 1218 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 KDM7AQ6ZMT4 941 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 LRRC8DQ7L1W4 858 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 GIMAP8Q8ND71 665 aaPredicted RBP15.81■□□□□ 0.12
COL5A1-208ENST00000618395 XAGE3Q8WTP9 111 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 CDY2AQ9Y6F7 541 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 CDY1Q9Y6F8 540 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 ATP1A3P13637 1013 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 FBXW4P57775 412 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 EXOSC10Q01780 885 aaKnown RBP15.81■□□□□ 0.12
COL5A1-208ENST00000618395 NSUN2Q08J23 767 aaKnown RBP eCLIP15.81■□□□□ 0.12
COL5A1-208ENST00000618395 IGF1RP08069 1367 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 TYK2P29597 1187 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 PDIA2Q13087 525 aaKnown RBP15.81■□□□□ 0.12
COL5A1-208ENST00000618395 RIN3Q8TB24 985 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 WDR24Q96S15 920 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 JMJD4Q9H9V9 463 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 PCDHGB4Q9UN71 923 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 KDM5AP29375 1690 aaKnown RBP15.81■□□□□ 0.12
COL5A1-208ENST00000618395 VAMP4O75379 141 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 SEC24CP53992 1094 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 RBBP7Q16576 425 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 CLEC4GQ6UXB4 293 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 SYDE1Q6ZW31 735 aaPredicted RBP15.81■□□□□ 0.12
COL5A1-208ENST00000618395 WNT8AQ9H1J5 351 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 FBXO9Q9UK97 447 aaPredicted RBP15.81■□□□□ 0.12
COL5A1-208ENST00000618395 ITM2BQ9Y287 266 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 TMEM120BA0PK00 339 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 ZNF233A6NK53 670 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 PURAQ00577 322 aaKnown RBP15.81■□□□□ 0.12
COL5A1-208ENST00000618395 RNASE11Q8TAA1 199 aaKnown RBP15.81■□□□□ 0.12
COL5A1-208ENST00000618395 GPBP1L1Q9HC44 474 aaPredicted RBP15.81■□□□□ 0.12
COL5A1-208ENST00000618395 ARHGEF10LQ9HCE6 1279 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 CHMP1AQ9HD42 196 aaPredicted RBP15.81■□□□□ 0.12
COL5A1-208ENST00000618395 EMILIN1Q9Y6C2 1016 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 TRIM49BA6NDI0 452 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 A8MXQ7 604 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 TRIM49D1C9J1S8 452 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 ATP12AP54707 1039 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 LRRC1Q9BTT6 524 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 TTC7AQ9ULT0 858 aaPredicted RBP15.8■□□□□ 0.12
COL5A1-208ENST00000618395 TYW5A2RUC4 315 aaKnown RBP15.8■□□□□ 0.12
COL5A1-208ENST00000618395 KLHL41O60662 606 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 C1DQ13901 141 aaKnown RBP15.8■□□□□ 0.12
COL5A1-208ENST00000618395 ITFG2Q969R8 447 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 ANAPC7Q9UJX3 599 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 GRIN2BQ13224 1484 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 A0A087WWV3 80 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 SMIM31A0A1B0GVY4 71 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 EVPLLA8MZ36 301 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 DCUN1D5Q9BTE7 237 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 DDX47Q9H0S4 455 aaKnown RBP15.8■□□□□ 0.12
COL5A1-208ENST00000618395 TIMMDC1Q9NPL8 285 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 MYH15Q9Y2K3 1946 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 CALB2P22676 271 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 C12orf60Q5U649 245 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 TMEM110Q86TL2 294 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 ZNF507Q8TCN5 953 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 LPIN2Q92539 896 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 RXFP1Q9HBX9 757 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 FKBP14Q9NWM8 211 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 TNNQ9UQP3 1299 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 MYO1DO94832 1006 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 FASTKD1Q53R41 847 aaKnown RBP15.8■□□□□ 0.12
COL5A1-208ENST00000618395 RASSF6Q6ZTQ3 369 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 ZNF654Q8IZM8 581 aa15.8■□□□□ 0.12
COL5A1-208ENST00000618395 hCG_1642624A0A1W2PR95 340 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 CCDC182A6NF36 153 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 TNNI3KQ59H18 835 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 AKAP14Q86UN6 197 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 ZNF184Q99676 751 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-208ENST00000618395 FSD1LQ9BXM9 530 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 KLHL3Q9UH77 587 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 CPSF3Q9UKF6 684 aaKnown RBP15.79■□□□□ 0.12
COL5A1-208ENST00000618395 FPGT-TNNI3KV9GXZ4 949 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 TROQ12816 1431 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-208ENST00000618395 CCDC157Q569K6 752 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 ATG14Q6ZNE5 492 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 ENTPD7Q9NQZ7 604 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 COMMD3-BMI1R4GMX3 469 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 SRP72O76094 671 aaKnown RBP15.79■□□□□ 0.12
COL5A1-208ENST00000618395 ANO4Q32M45 955 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 CCNI2Q6ZMN8 369 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-208ENST00000618395 ZKSCAN4Q969J2 545 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-208ENST00000618395 ALG13Q9NP73 1137 aaKnown RBP15.79■□□□□ 0.12
COL5A1-208ENST00000618395 PSMC3IPQ9P2W1 217 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-208ENST00000618395 HAO1Q9UJM8 370 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 ZNF180Q9UJW8 692 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 RCOR1Q9UKL0 485 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 ADGRG1Q9Y653 693 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 IRGCQ6NXR0 463 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 RNF19BQ6ZMZ0 732 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 ERAP1Q9NZ08 941 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 ANXA1P04083 346 aa15.79■□□□□ 0.12
COL5A1-208ENST00000618395 ATP1A1P05023 1023 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms