RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CYP2C19P33261 490 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 MCAMP43121 646 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 PDAP1Q13442 181 aaKnown RBP11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 BTN2A2Q8WVV5 523 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 MED15Q96RN5 788 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 ELAC2Q9BQ52 826 aaKnown RBP11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 TRAF3IP3Q9Y228 551 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 MROH7-TTC4A0A0A0MT08 1334 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 ABCA8O94911 1581 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 MYO9BQ13459 2157 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 ARHGEF40Q8TER5 1519 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 ANGPT2O15123 496 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 HIST1H2AGP0C0S8 130 aaPredicted RBP11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 HIST1H2ADP20671 130 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 BEND6Q5SZJ8 279 aaPredicted RBP11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 LRRC8EQ6NSJ5 796 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 SFR1Q86XK3 245 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 APPL2Q8NEU8 664 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 HIST1H2AHQ96KK5 128 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 TGS1Q96RS0 853 aaKnown RBP11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 HIST1H2AJQ99878 128 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 H2AFJQ9BTM1 129 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 TRPM1Q7Z4N2 1603 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 POTEMA6NI47 508 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 H0Y626 953 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 CHUKO15111 745 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 TRIM16O95361 564 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 ASMTLO95671 621 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 TYK2P29597 1187 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 ARHGEF7Q14155 803 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 PHKG1Q16816 387 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 PLEKHM3Q6ZWE6 761 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 CATSPER3Q86XQ3 398 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 SYNE4Q8N205 404 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 CEP70Q8NHQ1 597 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 OTUD5Q96G74 571 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 TMEM161AQ9NX61 479 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 MYH6P13533 1939 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 SERPIND1P05546 499 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 CDH2P19022 906 aaPredicted RBP11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 CDH6P55285 790 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 ADGRF4Q8IZF3 695 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 TNIP2Q8NFZ5 429 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 TADA1Q96BN2 335 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 PARD6BQ9BYG5 372 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 MUC3BQ9H195 1237 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 GLI2P10070 1586 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 AKT1P31749 480 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 MRPL28Q13084 256 aaKnown RBP11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 NBPF10Q6P3W6 841 aaKnown RBP11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 RNF181Q9P0P0 153 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 STOML1Q9UBI4 398 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 DNAJC5BQ9UF47 199 aa11.79□□□□□ -0.52
CCDC144B-208ENST00000618081 P3H1Q32P28 736 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 HIBCHQ6NVY1 386 aaPredicted RBP11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 PIGBQ92521 554 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 GOLPH3LQ9H4A5 285 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 ZFATQ9P243 1243 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 PCSK1NQ9UHG2 260 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 APOA1P02647 267 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 USP11P51784 963 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 IER5Q5VY09 327 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 ANTXR1Q9H6X2 564 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 SLC38A7Q9NVC3 462 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 CLTCQ00610 1675 aaKnown RBP11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 YWHABP31946 246 aaKnown RBP11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 PMS2P54278 862 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 ATPAF2Q8N5M1 289 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 PLEKHA5Q9HAU0 1116 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 PSD3Q9NYI0 1048 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 PIN4Q9Y237 131 aaKnown RBP11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 MOCS2O96007 188 aaPredicted RBP11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 PCYT1AP49585 367 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 KCNQ4P56696 695 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 HPCAP84074 193 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 NBPF20Q3BBV1 942 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 TSC22D3Q99576 134 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 MPP6Q9NZW5 540 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 KIAA0391O15091 583 aaKnown RBP11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 SERPINI2O75830 405 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 NCALDP61601 193 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 GTF3C2Q8WUA4 911 aaPredicted RBP11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 RPAP3Q9H6T3 665 aaPredicted RBP11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 BARHL2Q9NY43 387 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 CAMSAP1Q5T5Y3 1602 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 FTLP02792 175 aaPredicted RBP11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 INPP5AQ14642 412 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 CENPPQ6IPU0 288 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 DYDC2Q96IM9 177 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 EIF2AK1Q9BQI3 630 aaKnown RBP11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 ERBB3P21860 1342 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 F5H423 210 aaPredicted RBP11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 CAPZA2P47755 286 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 GFPT1Q06210 699 aaPredicted RBP11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 CYFIP1Q7L576 1253 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 NRKQ7Z2Y5 1582 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 CPDO75976 1380 aa11.78□□□□□ -0.52
CCDC144B-208ENST00000618081 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms