RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 DERAQ9Y315 318 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 LTBP2Q14767 1821 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 MFAP3LO75121 409 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 ZC3H11AO75152 810 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDPN-211ENST00000617617 HSPA1AP0DMV8 641 aaKnown RBP12.75□□□□□ -0.37
PDPN-211ENST00000617617 HSPA1BP0DMV9 641 aaKnown RBP12.75□□□□□ -0.37
PDPN-211ENST00000617617 ZNF568Q3ZCX4 644 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 EEF1DP3Q658K8 133 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 CCDC186Q7Z3E2 898 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 WDR49Q8IV35 697 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 FAM126BQ8IXS8 530 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 CCDC155Q8N6L0 562 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 FAXDC2Q96IV6 333 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 TOX2Q96NM4 488 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 OSMRQ99650 979 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 NAA15Q9BXJ9 866 aaKnown RBP12.75□□□□□ -0.37
PDPN-211ENST00000617617 RNF208Q9H0X6 261 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 RBAKQ9NYW8 714 aaPredicted RBP12.75□□□□□ -0.37
PDPN-211ENST00000617617 CEP72Q9P209 647 aa12.75□□□□□ -0.37
PDPN-211ENST00000617617 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.75□□□□□ -0.37
PDPN-211ENST00000617617 AKR1B15C9JRZ8 316 aaPredicted RBP12.74□□□□□ -0.37
PDPN-211ENST00000617617 NOL4O94818 638 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 TPM1P09493 284 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 PON1P27169 355 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 GJA8P48165 433 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 PPFIBP1Q86W92 1011 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 SPC24Q8NBT2 197 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 TMEM40Q8WWA1 233 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 FAM81BQ96LP2 452 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 DEFB118Q96PH6 123 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 ASB7Q9H672 318 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 SIX2Q9NPC8 291 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 ZBED6P86452 979 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 MYL7Q01449 175 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 PPP3CAQ08209 521 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 EXOC3L4Q17RC7 722 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 XKR4Q5GH76 650 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 DCAF17Q5H9S7 520 aaPredicted RBP12.74□□□□□ -0.37
PDPN-211ENST00000617617 KRT39Q6A163 491 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 FAM228AQ86W67 206 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 ADPGKQ9BRR6 497 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 TMEM117Q9H0C3 514 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 ERVK-5Q9HDB9 667 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 KCND1Q9NSA2 647 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 ANKFY1Q9P2R3 1169 aa12.74□□□□□ -0.37
PDPN-211ENST00000617617 GOLGA8IPA6NC78 632 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 GOLGA8JA6NMD2 632 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 C4BPAP04003 597 aaKnown RBP12.73□□□□□ -0.37
PDPN-211ENST00000617617 LBX1P52954 281 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 DLG4P78352 724 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 CETN1Q12798 172 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 ZACNQ401N2 412 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 CBWD6Q4V339 395 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 CBWD3Q5JTY5 395 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 FBXO47Q5MNV8 452 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 CBWD5Q5RIA9 395 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 CATSPER4Q7RTX7 472 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 FMNL3Q8IVF7 1028 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 EHBP1Q8NDI1 1231 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 SCLT1Q96NL6 688 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 TDRD15B5MCY1 1934 aaKnown RBP12.73□□□□□ -0.37
PDPN-211ENST00000617617 PITPNM1O00562 1244 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 GPR182O15218 404 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 ENOX2Q16206 610 aaKnown RBP12.73□□□□□ -0.37
PDPN-211ENST00000617617 MEA1Q16626 185 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 FAM47CQ5HY64 1035 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 UBXN11Q5T124 520 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 ALKAL1Q6UXT8 129 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 CREBRFQ8IUR6 639 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 BAP1Q92560 729 aa12.73□□□□□ -0.37
PDPN-211ENST00000617617 PARNO95453 639 aaKnown RBP12.72□□□□□ -0.37
PDPN-211ENST00000617617 DSC3Q14574 896 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 KLHDC7AQ5VTJ3 777 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 TRIM65Q6PJ69 517 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 TMEM139Q8IV31 216 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 NEK11Q8NG66 645 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 CACTINQ8WUQ7 758 aaKnown RBP12.72□□□□□ -0.37
PDPN-211ENST00000617617 KCNF1Q9H3M0 494 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 TRMT13Q9NUP7 481 aaKnown RBP12.72□□□□□ -0.37
PDPN-211ENST00000617617 NOC2LQ9Y3T9 749 aaKnown RBP12.72□□□□□ -0.37
PDPN-211ENST00000617617 TTC26A0AVF1 554 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 PTMAP06454 111 aaKnown RBP12.72□□□□□ -0.37
PDPN-211ENST00000617617 TRIM49P0CI25 452 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 TRIM49CP0CI26 452 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 ACOT2P49753 483 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 MXI1P50539 228 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 FXR1P51114 621 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDPN-211ENST00000617617 JAM2P57087 298 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 CCZ1BP86790 482 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 CCZ1P86791 482 aaPredicted RBP12.72□□□□□ -0.37
PDPN-211ENST00000617617 ZBTB41Q5SVQ8 909 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 U2AF1L4Q8WU68 220 aaKnown RBP12.72□□□□□ -0.37
PDPN-211ENST00000617617 ZNF516Q92618 1163 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 JAKMIP2Q96AA8 810 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 FAM124BQ9H5Z6 455 aaPredicted RBP12.72□□□□□ -0.37
PDPN-211ENST00000617617 GCNT4Q9P109 453 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 C2CD2Q9Y426 696 aa12.72□□□□□ -0.37
PDPN-211ENST00000617617 STAG3L1P0CL83 205 aa12.71□□□□□ -0.37
PDPN-211ENST00000617617 CKBP12277 381 aa12.71□□□□□ -0.37
PDPN-211ENST00000617617 CHMP4BP1P59074 171 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms