RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 RBBP8NLQ8NC74 664 aaPredicted RBP10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 UBA3Q8TBC4 463 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 EXT2Q93063 718 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 CFAP36Q96G28 342 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 GINM1Q9NU53 330 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 TSR3Q9UJK0 312 aaKnown RBP10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 STRIP2Q9ULQ0 834 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 IGSF9BQ9UPX0 1349 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 CCDC78A2IDD5 438 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 GHRP10912 638 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 UCHL3P15374 230 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 MNAT1P51948 309 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 PTPAQ15257 358 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 MMS22LQ6ZRQ5 1243 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 PCGF5Q86SE9 256 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 GMCL1P1Q8NEA9 526 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 CPB2Q96IY4 423 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 POP1Q99575 1024 aaKnown RBP10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 ZNF500O60304 480 aaPredicted RBP10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 EVI5O60447 810 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 ZC3H11AO75152 810 aaKnown RBP eCLIP10.79□□□□□ -0.684e-6■□□□□ 9.3
SMARCA1-205ENST00000617310 PGK1P00558 417 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 DNAJB2P25686 324 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 SOX5P35711 763 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 RFC5P40937 340 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 ERVK-9P63128 1117 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 ERVK-24P63145 666 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 LMNB2Q03252 620 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 USP50Q70EL3 339 aaPredicted RBP10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 FRMD5Q7Z6J6 570 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 ATP6V1E2Q96A05 226 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 TTC25Q96NG3 672 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 ABI2Q9NYB9 513 aaPredicted RBP10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 LIMA1Q9UHB6 759 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 MANSC4A6NHS7 340 aaPredicted RBP10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 DCDC2CA8MYV0 355 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 CALB1P05937 261 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 SCP2P22307 547 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 NPTX2P47972 431 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 CRY2Q49AN0 593 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 ELMSAN1Q6PJG2 1045 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 AMIGO3Q86WK7 504 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 EPC1Q9H2F5 836 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 ANKEF1Q9NU02 776 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 ASNSD1Q9NWL6 643 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 PPP2R3BQ9Y5P8 575 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 WDR91A4D1P6 747 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 PMLP29590 882 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 DR1Q01658 176 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 TMED2Q15363 201 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 XRRA1Q6P2D8 792 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 NOTUMQ6P988 496 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 CXCL17Q6UXB2 119 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 PDIK1LQ8N165 341 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 SYT2Q8N9I0 419 aaPredicted RBP10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 PGBD4Q96DM1 585 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 TMEM169Q96HH4 297 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 AGPAT3Q9NRZ7 376 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 G3BP2Q9UN86 482 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 TFR2Q9UP52 801 aa10.79□□□□□ -0.68
SMARCA1-205ENST00000617310 GMNNO75496 209 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 KRT3P12035 628 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 PDGFRAP16234 1089 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 SLC12A1Q13621 1099 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 BRD3Q15059 726 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 PGM5Q15124 567 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 SARM1Q6SZW1 724 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 DNAJB3Q8WWF6 145 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 FAF2Q96CS3 445 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 C18orf8Q96DM3 657 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 FAM118BQ9BPY3 351 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 HOMER3Q9NSC5 361 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 OGFRQ9NZT2 677 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 APEX2Q9UBZ4 518 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 NFU1Q9UMS0 254 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 SLC8A2Q9UPR5 921 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 PRRC2BQ5JSZ5 2229 aaKnown RBP10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 RRN3P2A6NIE6 340 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 YDJCA8MPS7 323 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 PPATQ06203 517 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 DEFB115Q30KQ5 88 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 ARHGEF2Q92974 986 aaKnown RBP10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 HDAC11Q96DB2 347 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 ADAM33Q9BZ11 813 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 MTMR12Q9C0I1 747 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 NMRK2Q9NPI5 230 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 TBX20Q9UMR3 447 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 GAKO14976 1311 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 PHLPP2Q6ZVD8 1323 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 ZNF541Q9H0D2 1346 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 ASAP2O43150 1006 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 THOC5Q13769 683 aaKnown RBP10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 GKAP1Q5VSY0 366 aaPredicted RBP10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 METTL7BQ6UX53 244 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 GSPT2Q8IYD1 628 aaKnown RBP10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 C1orf54Q8WWF1 131 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 HPDLQ96IR7 371 aa10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 TIMM13Q9Y5L4 95 aaPredicted RBP10.78□□□□□ -0.68
SMARCA1-205ENST00000617310 ADGRG1Q9Y653 693 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms