RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SCYL2Q6P3W7 929 aa6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 VSIG10LQ86VR7 867 aa6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 ERICH1Q86X53 443 aa6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 MICALL2Q8IY33 904 aa6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 EPS8L1Q8TE68 723 aa6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 ATP8B4Q8TF62 1192 aa6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 SHC3Q92529 594 aa6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 DHX38Q92620 1227 aaKnown RBP6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 P3H4Q92791 437 aa6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 FAM84AQ96KN4 292 aa6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 RPS6KC1Q96S38 1066 aa6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 WNT8AQ9H1J5 351 aa6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 C17orf75Q9HAS0 396 aa6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 TXNDC16Q9P2K2 825 aa6.02□□□□□ -1.45
SYNCRIP-204ENST00000616122 PHF20L1A8MW92 1017 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 PIK3CDO00329 1044 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 HLA-DRAP01903 254 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 YARSP54577 528 aaKnown RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 SLC12A3P55017 1021 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 DYNLT1P63172 113 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 NEDD9Q14511 834 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 ICE2Q659A1 982 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 ARHGEF18Q6ZSZ5 1173 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 CDR2LQ86X02 465 aaPredicted RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 SLC9A9Q8IVB4 645 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 MAP7D3Q8IWC1 876 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 GPD1LQ8N335 351 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 GPATCH11Q8N954 259 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 ATL2Q8NHH9 583 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 SLC5A5Q92911 643 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 MBOAT7Q96N66 472 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 TMEM8AQ9HCN3 771 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 ASTN1O14525 1302 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 RASSF10A6NK89 507 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 CYP11B1P15538 503 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 PPP1R2P3Q6NXS1 205 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 ZNF280CQ8ND82 737 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 SEPT1Q8WYJ6 367 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 TIPINQ9BVW5 301 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 ZNF408Q9H9D4 720 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 USP20Q9Y2K6 914 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 KRT1P04264 644 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 CLK2P49760 499 aaKnown RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 CORO7P57737 925 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 PRKCEQ02156 737 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 SPIRE1Q08AE8 756 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 LRRC14Q15048 493 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 ZRSR2Q15696 482 aaKnown RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 DUOXA2Q1HG44 320 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 ZBTB33Q86T24 672 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 RNF149Q8NC42 400 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 ARHGEF26Q96DR7 871 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 POP1Q99575 1024 aaKnown RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 MAK16Q9BXY0 300 aaKnown RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 TBX20Q9UMR3 447 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 NOP14P78316 857 aaKnown RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 FAM160B1Q5W0V3 765 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 MIS18BP1Q6P0N0 1132 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 SCARA5Q6ZMJ2 495 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 TBC1D1Q86TI0 1168 aaPredicted RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 SLC16A10Q8TF71 515 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 RSAD2Q8WXG1 361 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 MOV10L1Q9BXT6 1211 aaKnown RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 DNAI2Q9GZS0 605 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 KIAA1683Q9H0B3 1180 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 POLR3FQ9H1D9 316 aaPredicted RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 VAV3Q9UKW4 847 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 CHUKO15111 745 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 RARGP13631 454 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 YWHAGP61981 247 aaKnown RBP eCLIP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 SIAH1Q8IUQ4 282 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 PALM2Q8IXS6 379 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 RBM41Q96IZ5 413 aaKnown RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 PCSK1NQ9UHG2 260 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 SYNPO2Q9UMS6 1093 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 CLEC11AQ9Y240 323 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 IGLV3-22A0A075B6J6 115 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 A0A0A6YYK5 440 aaPredicted RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 RASA4BC9J798 803 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 RASA4O43374 803 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 FGFR4P22455 802 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 GNA15P30679 374 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 ABCD1P33897 745 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 MTM1Q13496 603 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 NBPF12Q5TAG4 269 aaPredicted RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 BSPRYQ5W0U4 402 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 CCDC13Q8IYE1 715 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 SCFD2Q8WU76 684 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 ATG4AQ8WYN0 398 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 XPO6Q96QU8 1125 aaKnown RBP6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 RBM15Q96T37 977 aaKnown RBP eCLIP6.01□□□□□ -1.451e-8■■■□□ 17.7
SYNCRIP-204ENST00000616122 NR2E1Q9Y466 385 aa6.01□□□□□ -1.45
SYNCRIP-204ENST00000616122 A0A1B0GUA9 196 aa6□□□□□ -1.45
SYNCRIP-204ENST00000616122 SYF2O95926 243 aaKnown RBP6□□□□□ -1.45
SYNCRIP-204ENST00000616122 VCAM1P19320 739 aa6□□□□□ -1.45
SYNCRIP-204ENST00000616122 MARK3P27448 753 aa6□□□□□ -1.45
SYNCRIP-204ENST00000616122 CCND2P30279 289 aa6□□□□□ -1.45
SYNCRIP-204ENST00000616122 PTENP60484 403 aa6□□□□□ -1.45
SYNCRIP-204ENST00000616122 BASP1P80723 227 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms