RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 GOLGA8KD6RF30 607 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 VSNL1P62760 191 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
TCF4-248ENST00000616053 MAPRE1Q15691 268 aaKnown RBP13.32□□□□□ -0.28
TCF4-248ENST00000616053 MICALL2Q8IY33 904 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 ATP11CQ8NB49 1132 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 SLITRK1Q96PX8 696 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 FAM217BQ9NTX9 383 aaPredicted RBP13.32□□□□□ -0.28
TCF4-248ENST00000616053 HEATR9A2RTY3 570 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 RPS6KA5O75582 802 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 C4BPBP20851 252 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 FEN1P39748 380 aaKnown RBP13.32□□□□□ -0.28
TCF4-248ENST00000616053 GPSM2P81274 684 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 ALS2CLQ60I27 953 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 ELP3Q9H9T3 547 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 CCDC177Q9NQR7 707 aaPredicted RBP13.32□□□□□ -0.28
TCF4-248ENST00000616053 PKD2L2Q9NZM6 624 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 TRPC4Q9UBN4 977 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 NRBP1Q9UHY1 535 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 GFPT2O94808 682 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 CHRNDQ07001 517 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 PABPC5Q96DU9 382 aaKnown RBP13.32□□□□□ -0.28
TCF4-248ENST00000616053 ADNPQ9H2P0 1102 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 RBMXL2O75526 392 aaKnown RBP13.32□□□□□ -0.28
TCF4-248ENST00000616053 RAG1P15918 1043 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 SERPINB10P48595 397 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 PLTPP55058 493 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 RAVER2Q9HCJ3 691 aaKnown RBP13.32□□□□□ -0.28
TCF4-248ENST00000616053 EXOSC4Q9NPD3 245 aaKnown RBP13.32□□□□□ -0.28
TCF4-248ENST00000616053 NMRK1Q9NWW6 199 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 LNPEPQ9UIQ6 1025 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
TCF4-248ENST00000616053 VPS4BO75351 444 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 KRT38O76015 456 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 BMP10O95393 424 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 TPI1P60174 286 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 DYNC1I2Q13409 638 aaKnown RBP13.32□□□□□ -0.28
TCF4-248ENST00000616053 TFDP2Q14188 446 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 KIAA2013Q8IYS2 634 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 TBCDQ9BTW9 1192 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 PHACTR1Q9C0D0 580 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 S100A5P33763 92 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 CES5AQ6NT32 575 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 PCMTD2Q9NV79 361 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 CYP39A1Q9NYL5 469 aa13.32□□□□□ -0.28
TCF4-248ENST00000616053 PIK3R2O00459 728 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 AP3D1O14617 1153 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 UBA1P22314 1058 aaKnown RBP13.31□□□□□ -0.28
TCF4-248ENST00000616053 ALCAMQ13740 583 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 EIF4A2Q14240 407 aaKnown RBP13.31□□□□□ -0.28
TCF4-248ENST00000616053 RIN3Q8TB24 985 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 MRPS31Q92665 395 aaKnown RBP13.31□□□□□ -0.28
TCF4-248ENST00000616053 MASTLQ96GX5 879 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 ARMC7Q9H6L4 198 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 DNAJC12Q9UKB3 198 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 ABCC4O15439 1325 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 PNOCQ13519 176 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 NEK10Q6ZWH5 1172 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 IFNL3Q8IZI9 196 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 SLC52A2Q9HAB3 445 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 SLC27A2O14975 620 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 GJC2Q5T442 439 aaPredicted RBP13.31□□□□□ -0.28
TCF4-248ENST00000616053 SPATS2Q86XZ4 545 aaKnown RBP13.31□□□□□ -0.28
TCF4-248ENST00000616053 ZNF280CQ8ND82 737 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 DHX35Q9H5Z1 703 aaKnown RBP13.31□□□□□ -0.28
TCF4-248ENST00000616053 BCL2L12Q9HB09 334 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 SIK3Q9Y2K2 1263 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 ABCC5O15440 1437 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 YEATS2Q9ULM3 1422 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 PRODHO43272 600 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 SPAG7O75391 227 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 R3HCC1LQ7Z5L2 792 aaKnown RBP13.31□□□□□ -0.28
TCF4-248ENST00000616053 SLC44A2Q8IWA5 706 aaPredicted RBP13.31□□□□□ -0.28
TCF4-248ENST00000616053 CRLS1Q9UJA2 301 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 ATP9BO43861 1147 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 KRT76Q01546 638 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 GUCY2DQ02846 1103 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 CYP24A1Q07973 514 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 SNAPC2Q13487 334 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 PLD3Q8IV08 490 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 SOHLH2Q9NX45 425 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 ZMYND8Q9ULU4 1186 aaPredicted RBP13.31□□□□□ -0.28
TCF4-248ENST00000616053 BLMP54132 1417 aaPredicted RBP13.31□□□□□ -0.28
TCF4-248ENST00000616053 HNRNPRO43390 633 aaKnown RBP13.31□□□□□ -0.28
TCF4-248ENST00000616053 OR6A2O95222 327 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 CHI3L1P36222 383 aaPredicted RBP13.31□□□□□ -0.28
TCF4-248ENST00000616053 TMEM132DQ14C87 1099 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 FAAH2Q6GMR7 532 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 NUP93Q8N1F7 819 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 BFARQ9NZS9 450 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
TCF4-248ENST00000616053 IL10P22301 178 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 HOXC12P31275 282 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 ANKRD44Q8N8A2 993 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 CIPCQ9C0C6 399 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 BHMT2Q9H2M3 363 aa13.31□□□□□ -0.28
TCF4-248ENST00000616053 PRIM2P49643 509 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 MARK2Q7KZI7 788 aaKnown RBP13.3□□□□□ -0.28
TCF4-248ENST00000616053 USP44Q9H0E7 712 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 MARK1Q9P0L2 795 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms