RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 FBXL18Q96ME1 805 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 ADAMTS10Q9H324 1103 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 FZD8Q9H461 694 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 IFT122Q9HBG6 1241 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 MAGEC2Q9UBF1 373 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-212ENST00000613856 STYXL1Q9Y6J8 313 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 NLRC5Q86WI3 1866 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 A0A087WZ62 844 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 A0A1B0GTH6 734 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 H3BQ06 376 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-212ENST00000613856 PITPNM1O00562 1244 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 HNRNPDLO14979 420 aaKnown RBP12.48□□□□□ -0.41
SLIRP-212ENST00000613856 KIAA0391O15091 583 aaKnown RBP12.48□□□□□ -0.41
SLIRP-212ENST00000613856 MAPK13O15264 365 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 CBFA2T2O43439 604 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 PRKCBP05771 671 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 CDK11BP21127 795 aaKnown RBP12.48□□□□□ -0.41
SLIRP-212ENST00000613856 GARTP22102 1010 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 CDC25BP30305 580 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 SSTR3P32745 418 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-212ENST00000613856 ZNF75DP51815 510 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 ZNF200P98182 395 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-212ENST00000613856 HSP90AA2PQ14568 343 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-212ENST00000613856 KRT31Q15323 416 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 PCBP1Q15365 356 aaKnown RBP eCLIP12.48□□□□□ -0.41
SLIRP-212ENST00000613856 SLC39A4Q6P5W5 647 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 FDXACB1Q9BRP7 624 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-212ENST00000613856 C17orf80Q9BSJ5 609 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 MRPL4Q9BYD3 311 aaKnown RBP12.48□□□□□ -0.41
SLIRP-212ENST00000613856 TRIM5Q9C035 493 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 FAM49AQ9H0Q0 323 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-212ENST00000613856 IKZF4Q9H2S9 585 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 PRMT7Q9NVM4 692 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-212ENST00000613856 MICAL3Q7RTP6 2002 aa12.48□□□□□ -0.41
SLIRP-212ENST00000613856 MYO7AQ13402 2215 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 USP34Q70CQ2 3546 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 CNTNAP2Q9UHC6 1331 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 LINC01553A4QN01 128 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 ACKR2O00590 384 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 CLIC2O15247 247 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 NBNO60934 754 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 GPR32O75388 356 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 ADCY5O95622 1261 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 SERPINC1P01008 464 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 EDN1P05305 212 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 TPM3P06753 285 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 EPB41P11171 864 aaKnown RBP12.47□□□□□ -0.41
SLIRP-212ENST00000613856 RFC2P35250 354 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 LIG4P49917 911 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 NLRP11P59045 1033 aaKnown RBP12.47□□□□□ -0.41
SLIRP-212ENST00000613856 LEXMQ3ZCV2 418 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 HSP90AA4PQ58FG1 418 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 SLFN12LQ6IEE8 588 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 PTCRAQ6ISU1 281 aaPredicted RBP12.47□□□□□ -0.41
SLIRP-212ENST00000613856 ARMCX5Q6P1M9 558 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.47□□□□□ -0.41
SLIRP-212ENST00000613856 FRMD5Q7Z6J6 570 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 RSPH3Q86UC2 560 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 DNAJB3Q8WWF6 145 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 NLRP7Q8WX94 980 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 WNT8BQ93098 351 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 BICD1Q96G01 975 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 PDLIM2Q96JY6 352 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 CBWD1Q9BRT8 395 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 METTL14Q9HCE5 456 aaKnown RBP12.47□□□□□ -0.41
SLIRP-212ENST00000613856 HSPBP1Q9NZL4 362 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 IFNKQ9P0W0 207 aa12.47□□□□□ -0.41
SLIRP-212ENST00000613856 RALGAPA2Q2PPJ7 1873 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 TISP43B9A030 160 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 ANKRD63C9JTQ0 380 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 INO80B-WBP1J3KQ70 363 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 CAND2O75155 1236 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 TOM1L1O75674 476 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 AKAP3O75969 853 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 ADSSP30520 456 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 PSMC2P35998 433 aaKnown RBP12.46□□□□□ -0.41
SLIRP-212ENST00000613856 KCNJ6P48051 423 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 COPB1P53618 953 aaKnown RBP12.46□□□□□ -0.41
SLIRP-212ENST00000613856 UBASH3AP57075 661 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 MCCD1P59942 119 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-212ENST00000613856 ERVK-21P61565 698 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 MRPS6P82932 125 aaKnown RBP12.46□□□□□ -0.41
SLIRP-212ENST00000613856 PLCB2Q00722 1185 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 PPP2R3AQ06190 1150 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 ENPEPQ07075 957 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 CCDC173Q0VFZ6 552 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 PTK7Q13308 1070 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 AMHR2Q16671 573 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 MAN2A1Q16706 1144 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 CCDC40Q4G0X9 1142 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 TRIM59Q8IWR1 403 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 XXYLT1Q8NBI6 393 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 SNX27Q96L92 541 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 SCLT1Q96NL6 688 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 ACO2Q99798 780 aaKnown RBP12.46□□□□□ -0.41
SLIRP-212ENST00000613856 TUBGCP2Q9BSJ2 902 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 ZBED2Q9BTP6 218 aa12.46□□□□□ -0.41
SLIRP-212ENST00000613856 GCOM2Q9BZD3 368 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-212ENST00000613856 INO80BQ9C086 356 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-212ENST00000613856 XPO4Q9C0E2 1151 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms