RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 DDX42Q86XP3 938 aaKnown RBP eCLIP17.73■□□□□ 0.43
CNOT3-208ENST00000613073 SULF1Q8IWU6 871 aa17.73■□□□□ 0.43
CNOT3-208ENST00000613073 TMEM161BQ8NDZ6 487 aa17.73■□□□□ 0.43
CNOT3-208ENST00000613073 PLEKHO2Q8TD55 490 aa17.73■□□□□ 0.43
CNOT3-208ENST00000613073 U2AF1L4Q8WU68 220 aaKnown RBP17.73■□□□□ 0.43
CNOT3-208ENST00000613073 ATP6V0A1Q93050 837 aa17.73■□□□□ 0.43
CNOT3-208ENST00000613073 DCPSQ96C86 337 aaKnown RBP17.73■□□□□ 0.43
CNOT3-208ENST00000613073 STK33Q9BYT3 514 aa17.73■□□□□ 0.43
CNOT3-208ENST00000613073 FHDC1Q9C0D6 1143 aaPredicted RBP17.73■□□□□ 0.43
CNOT3-208ENST00000613073 KMT5AQ9NQR1 393 aa17.73■□□□□ 0.43
CNOT3-208ENST00000613073 BTBD7Q9P203 1132 aa17.73■□□□□ 0.43
CNOT3-208ENST00000613073 APEX2Q9UBZ4 518 aa17.73■□□□□ 0.43
CNOT3-208ENST00000613073 TBX20Q9UMR3 447 aa17.73■□□□□ 0.43
CNOT3-208ENST00000613073 DDX3XO00571 662 aaKnown RBP eCLIP17.72■□□□□ 0.43
CNOT3-208ENST00000613073 SOX5P35711 763 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 ITIH3Q06033 890 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 GNPTABQ3T906 1256 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 GLE1Q53GS7 698 aaKnown RBP17.72■□□□□ 0.43
CNOT3-208ENST00000613073 ZNF483Q8TF39 744 aaPredicted RBP17.72■□□□□ 0.43
CNOT3-208ENST00000613073 ZNF526Q8TF50 670 aaPredicted RBP17.72■□□□□ 0.43
CNOT3-208ENST00000613073 OTUD5Q96G74 571 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 ELP3Q9H9T3 547 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 TMBIM4Q9HC24 238 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 CSADQ9Y600 493 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 TRAPPC3O43617 180 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 ADSSP30520 456 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 ELF3P78545 371 aaPredicted RBP17.72■□□□□ 0.43
CNOT3-208ENST00000613073 PRKCEQ02156 737 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 ZNF572Q7Z3I7 529 aaPredicted RBP17.72■□□□□ 0.43
CNOT3-208ENST00000613073 CBWD2Q8IUF1 395 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 GLYCTKQ8IVS8 523 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 RAPGEF5Q92565 580 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 CCDC127Q96BQ5 260 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 SENP7Q9BQF6 1050 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 GPR88Q9GZN0 384 aa17.72■□□□□ 0.43
CNOT3-208ENST00000613073 SPATA31C2B4DYI2 1134 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 IRF6O14896 467 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 STBD1O95210 358 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 FERP16591 822 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 MTERF2Q49AM1 385 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 SH3D19Q5HYK7 790 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 RDM1Q8NG50 284 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 RUBCNQ92622 972 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 CLMNQ96JQ2 1002 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 NOVA2Q9UNW9 492 aaKnown RBP17.71■□□□□ 0.43
CNOT3-208ENST00000613073 PFASO15067 1338 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 WDR81Q562E7 1941 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 GRID2IPA4D2P6 1211 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 RAD51CO43502 376 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 ADRB2P07550 413 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 CNGA1P29973 690 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 MAP2K1Q02750 393 aaPredicted RBP17.71■□□□□ 0.43
CNOT3-208ENST00000613073 MYBPC2Q14324 1141 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 C1orf220Q5T0J3 134 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 VPS36Q86VN1 386 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 NCAPG2Q86XI2 1143 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 ARFGAP2Q8N6H7 521 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 LMO3Q8TAP4 145 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 MDM1Q8TC05 714 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 PARD3BQ8TEW8 1205 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 LMBR1Q8WVP7 490 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 ZBTB10Q96DT7 871 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 POP1Q99575 1024 aaKnown RBP17.71■□□□□ 0.43
CNOT3-208ENST00000613073 TIPINQ9BVW5 301 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 R3HDMLQ9H3Y0 253 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 UBE2TQ9NPD8 197 aaPredicted RBP17.71■□□□□ 0.43
CNOT3-208ENST00000613073 ADARB2Q9NS39 739 aaKnown RBP17.71■□□□□ 0.43
CNOT3-208ENST00000613073 SEPT11Q9NVA2 429 aaKnown RBP17.71■□□□□ 0.43
CNOT3-208ENST00000613073 USP20Q9Y2K6 914 aa17.71■□□□□ 0.43
CNOT3-208ENST00000613073 FOXN3O00409 490 aaPredicted RBP17.7■□□□□ 0.42
CNOT3-208ENST00000613073 UPP2O95045 317 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 PRLRP16471 622 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 TNFRSF8P28908 595 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 CTNNA1P35221 906 aaKnown RBP17.7■□□□□ 0.42
CNOT3-208ENST00000613073 HSD17B3P37058 310 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 STXBP2Q15833 593 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 ABHD15Q6UXT9 468 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 EEPD1Q7L9B9 569 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 TBC1D1Q86TI0 1168 aaPredicted RBP17.7■□□□□ 0.42
CNOT3-208ENST00000613073 ARMC2Q8NEN0 867 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 LNX1Q8TBB1 728 aaPredicted RBP17.7■□□□□ 0.42
CNOT3-208ENST00000613073 MICAL1Q8TDZ2 1067 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 CDHR1Q96JP9 859 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 ADGRA3Q8IWK6 1321 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 LBX2Q6XYB7 198 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 ARHGEF19Q8IW93 802 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 CEP120Q8N960 986 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 UBLCP1Q8WVY7 318 aaPredicted RBP17.7■□□□□ 0.42
CNOT3-208ENST00000613073 ELMO3Q96BJ8 720 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 ST6GALNAC4Q9H4F1 302 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 CYP26B1Q9NR63 512 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 SLC12A6Q9UHW9 1150 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 GGA2Q9UJY4 613 aa17.7■□□□□ 0.42
CNOT3-208ENST00000613073 MGRN1O60291 552 aa17.69■□□□□ 0.42
CNOT3-208ENST00000613073 GRIK3Q13003 919 aa17.69■□□□□ 0.42
CNOT3-208ENST00000613073 XRCC4Q13426 336 aa17.69■□□□□ 0.42
CNOT3-208ENST00000613073 ZKSCAN8Q15776 578 aaPredicted RBP17.69■□□□□ 0.42
CNOT3-208ENST00000613073 SNRNP35Q16560 246 aaKnown RBP17.69■□□□□ 0.42
CNOT3-208ENST00000613073 C11orf91Q3C1V1 193 aa17.69■□□□□ 0.42
CNOT3-208ENST00000613073 GKAP1Q5VSY0 366 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms